contig_metadata
44 rows where analysis = "blastn", bioproject = "PRJNA1066877" and tax_phylum = "Pseudomonadota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 180323 | 180323 | PRJNA1066877_S_NODE_11601_length_166_cov_0.871795_g11566_i0 | PRJNA1066877 | 11601 | 166 | 0.871795 | 1.4471797 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g11566 | i0 | 100 | 124.993975903614 | 166 | 0 | 100 | 0 | 1 | 166 | 1029269 | 1029434 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 20749 | 307 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 1454971 | 1454971 | PRJNA1066877_S_NODE_11882_length_165_cov_0.879310_g11847_i0 | PRJNA1066877 | 11882 | 165 | 0.87931 | 1.4508615 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 300 | 4.46e-77 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g11847 | i0 | 99.394 | 24.2969696969697 | 165 | 1 | 100 | 0 | 1 | 165 | 34075 | 34239 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 4009 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 1455109 | 1455109 | PRJNA1066877_S_NODE_6962_length_202_cov_1.019608_g6927_i0 | PRJNA1066877 | 6962 | 202 | 1.019608 | 2.05960816 | Faucicola osloensis | 34062 | Bacteria | Bacteria | 300 | 5.69e-77 | NTclustered | gi|1654274213|gb|CP040258.1| | 34062 | g6927 | i0 | 97.701 | 230.470297029703 | 174 | 4 | 86 | 0 | 29 | 202 | 246787 | 246614 | Moraxella osloensis strain MOXF1 plasmid pMOXF1, complete sequence | blastn | 46555 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 1455111 | 1455111 | PRJNA1066877_S_NODE_702_length_493_cov_3.195946_g668_i0 | PRJNA1066877 | 702 | 493 | 3.195946 | 15.75601378 | Vibrio vulnificus | 672 | Bacteria | Bacteria | 900 | 0 | NTclustered | gi|6635278|gb|AF063303.1|AF063303 | 672 | g668 | i0 | 99.595 | 79.2718052738337 | 494 | 0 | 100 | 2 | 1 | 493 | 753 | 261 | Vibrio vulnificus nuclease precursor, gene, complete cds | blastn | 39081 | 900 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio vulnificus | ||
| 2730805 | 2730805 | PRJNA1066877_S_NODE_11043_length_169_cov_1.166667_g11008_i0 | PRJNA1066877 | 11043 | 169 | 1.166667 | 1.97166723 | Escherichia coli | 562 | Bacteria | Bacteria | 213 | 6.12e-51 | NTclustered | gi|2505334976|gb|CP122768.1| | 562 | g11008 | i0 | 99.153 | 103.85798816568 | 118 | 1 | 100 | 0 | 26 | 143 | 1235612 | 1235729 | Escherichia coli strain ETEC1738 chromosome, complete genome | blastn | 17552 | 213 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 2730903 | 2730903 | PRJNA1066877_S_NODE_4803_length_232_cov_1.125683_g4768_i0 | PRJNA1066877 | 4803 | 232 | 1.125683 | 2.61158456 | Haemophilus parainfluenzae | 729 | Bacteria | Bacteria | 396 | 8.319999999999995e-106 | NTclustered | gi|301154649|emb|FQ312002.1| | 862965 | g4768 | i0 | 97.414 | 19 | 232 | 6 | 100 | 0 | 1 | 232 | 1347982 | 1347751 | Haemophilus parainfluenzae T3T1 complete genome | blastn | 4408 | 396 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Haemophilus | Haemophilus parainfluenzae | ||
| 3563496 | 3563496 | PRJNA1066877_S_NODE_10883_length_170_cov_1.264463_g10848_i0 | PRJNA1066877 | 10883 | 170 | 1.264463 | 2.1495871 | Stenotrophomonas | 40323 | Bacteria | Bacteria | 315 | 1.64e-81 | NTclustered | gi|1399034630|gb|CP029773.1| | 40324 | g10848 | i0 | 100 | 32.6352941176471 | 170 | 0 | 100 | 0 | 1 | 170 | 916897 | 916728 | Stenotrophomonas maltophilia strain SJTL3 chromosome, complete genome | blastn | 5548 | 315 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas maltophilia | ||
| 4006729 | 4006729 | PRJNA1066877_S_NODE_11924_length_165_cov_0.879310_g11889_i0 | PRJNA1066877 | 11924 | 165 | 0.87931 | 1.4508615 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 289 | 9.66e-74 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g11889 | i0 | 98.182 | 40.9575757575758 | 165 | 3 | 100 | 0 | 1 | 165 | 4953719 | 4953555 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 6758 | 289 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 4840968 | 4840968 | PRJNA1066877_S_NODE_12704_length_162_cov_0.902655_g12669_i0 | PRJNA1066877 | 12704 | 162 | 0.902655 | 1.4623011 | Stenotrophomonas | 40323 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|2235474145|gb|CP080573.1| | 40324 | g12669 | i0 | 100 | 100 | 162 | 0 | 100 | 0 | 1 | 162 | 263286 | 263447 | Stenotrophomonas maltophilia strain FZD2 chromosome, complete genome | blastn | 16200 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas maltophilia | ||
| 5283117 | 5283117 | PRJNA1066877_S_NODE_11605_length_166_cov_0.871795_g11570_i0 | PRJNA1066877 | 11605 | 166 | 0.871795 | 1.4471797 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 279 | 5.86e-71 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g11570 | i0 | 97.006 | 1.00602409638554 | 167 | 3 | 100 | 2 | 1 | 166 | 2311811 | 2311976 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 167 | 279 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 5283119 | 5283119 | PRJNA1066877_S_NODE_11645_length_166_cov_0.871795_g11610_i0 | PRJNA1066877 | 11645 | 166 | 0.871795 | 1.4471797 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g11610 | i0 | 100 | 1 | 166 | 0 | 100 | 0 | 1 | 166 | 1107977 | 1107812 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 166 | 307 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 5283136 | 5283136 | PRJNA1066877_S_NODE_12445_length_163_cov_0.894737_g12410_i0 | PRJNA1066877 | 12445 | 163 | 0.894737 | 1.45842131 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 296 | 5.68e-76 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g12410 | i0 | 99.387 | 1 | 163 | 1 | 100 | 0 | 1 | 163 | 1006038 | 1005876 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 163 | 296 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 6116069 | 6116069 | PRJNA1066877_S_NODE_11565_length_166_cov_1.256410_g11530_i0 | PRJNA1066877 | 11565 | 166 | 1.25641 | 2.0856406 | Stenotrophomonas | 40323 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|1777128408|gb|CP040438.1| | 40324 | g11530 | i0 | 100 | 99.8192771084337 | 166 | 0 | 100 | 0 | 1 | 166 | 984755 | 984920 | Stenotrophomonas maltophilia strain PEG-173 chromosome, complete genome | blastn | 16570 | 307 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas maltophilia | ||
| 6558254 | 6558254 | PRJNA1066877_S_NODE_12426_length_163_cov_0.894737_g12391_i0 | PRJNA1066877 | 12426 | 163 | 0.894737 | 1.45842131 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g12391 | i0 | 100 | 1 | 163 | 0 | 100 | 0 | 1 | 163 | 4503111 | 4502949 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 163 | 302 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 7832879 | 7832879 | PRJNA1066877_S_NODE_10567_length_172_cov_1.349593_g10532_i0 | PRJNA1066877 | 10567 | 172 | 1.349593 | 2.32129996 | Paucibacter sediminis | 3019553 | Bacteria | Bacteria | 300 | 4.67e-77 | NTclustered | gi|2517185782|gb|CP116346.1| | 3019553 | g10532 | i0 | 98.81 | 277.796511627907 | 168 | 2 | 98 | 0 | 5 | 172 | 899430 | 899597 | Paucibacter sediminis strain S2-9 chromosome, complete genome | blastn | 47781 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Paucibacter sediminis | ||
| 7832904 | 7832904 | PRJNA1066877_S_NODE_11647_length_166_cov_0.871795_g11612_i0 | PRJNA1066877 | 11647 | 166 | 0.871795 | 1.4471797 | Methylobacterium brachiatum | 269660 | Bacteria | Bacteria | 302 | 1.2500000000000001e-77 | NTclustered | gi|1498425080|gb|CP033231.1| | 269660 | g11612 | i0 | 99.398 | 18.3674698795181 | 166 | 1 | 100 | 0 | 1 | 166 | 5057780 | 5057945 | Methylobacterium brachiatum strain TX0642 chromosome | blastn | 3049 | 302 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium brachiatum | ||
| 7832932 | 7832932 | PRJNA1066877_S_NODE_12947_length_161_cov_0.910714_g12912_i0 | PRJNA1066877 | 12947 | 161 | 0.910714 | 1.46624954 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 292 | 7.24e-75 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g12912 | i0 | 99.379 | 80.3229813664596 | 161 | 1 | 100 | 0 | 1 | 161 | 814475 | 814635 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 12932 | 292 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 7833072 | 7833072 | PRJNA1066877_S_NODE_8907_length_185_cov_1.125000_g8872_i0 | PRJNA1066877 | 8907 | 185 | 1.125 | 2.08125 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 337 | 3.89e-88 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g8872 | i0 | 99.459 | 8.84864864864865 | 185 | 1 | 100 | 0 | 1 | 185 | 4863495 | 4863311 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 1637 | 337 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 7833086 | 7833086 | PRJNA1066877_S_NODE_9787_length_178_cov_1.186047_g9752_i0 | PRJNA1066877 | 9787 | 178 | 1.186047 | 2.11116366 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 313 | 6.259999999999999e-81 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g9752 | i0 | 98.315 | 2.78089887640449 | 178 | 3 | 100 | 0 | 1 | 178 | 4947434 | 4947611 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 495 | 313 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 9107894 | 9107894 | PRJNA1066877_S_NODE_11408_length_167_cov_0.864407_g11373_i0 | PRJNA1066877 | 11408 | 167 | 0.864407 | 1.44355969 | Bradyrhizobium sp. SK17 | 2057741 | Bacteria | Bacteria | 303 | 3.5e-78 | NTclustered | gi|1304130835|gb|CP025113.1| | 2057741 | g11373 | i0 | 99.401 | 99.8622754491018 | 167 | 1 | 100 | 0 | 1 | 167 | 1401937 | 1402103 | Bradyrhizobium sp. SK17 chromosome, complete genome | blastn | 16677 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. SK17 | ||
| 9107944 | 9107944 | PRJNA1066877_S_NODE_2188_length_312_cov_1.239544_g2153_i0 | PRJNA1066877 | 2188 | 312 | 1.239544 | 3.86737728 | Roseateles sp. DAIF2 | 2714952 | Bacteria | Bacteria | 532 | 8.549999999999998e-147 | NTclustered | gi|1934957904|gb|CP049919.1| | 2714952 | g2153 | i0 | 97.436 | 270.227564102564 | 312 | 8 | 100 | 0 | 1 | 312 | 1896086 | 1896397 | Roseateles sp. DAIF2 chromosome, complete genome | blastn | 84311 | 532 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles sp. DAIF2 | ||
| 9108057 | 9108057 | PRJNA1066877_S_NODE_7568_length_196_cov_1.625850_g7533_i0 | PRJNA1066877 | 7568 | 196 | 1.62585 | 3.186666 | Haemophilus parainfluenzae | 729 | Bacteria | Bacteria | 357 | 3.2099999999999996e-94 | NTclustered | gi|301154649|emb|FQ312002.1| | 862965 | g7533 | i0 | 99.49 | 573.479591836735 | 196 | 1 | 100 | 0 | 1 | 196 | 667358 | 667553 | Haemophilus parainfluenzae T3T1 complete genome | blastn | 112402 | 357 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Haemophilus | Haemophilus parainfluenzae | ||
| 9941258 | 9941258 | PRJNA1066877_S_NODE_88_length_1164_cov_2.616143_g76_i0 | PRJNA1066877 | 88 | 1164 | 2.616143 | 30.45190452 | root | 1 | Root_unresolved | Root_unresolved | 1866 | 0 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g76 | i0 | 99.901 | 87.03264604811 | 1013 | 1 | 87 | 0 | 2 | 1014 | 4382967 | 4381955 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 101306 | 1875 | 0.9952 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 10383586 | 10383586 | PRJNA1066877_S_NODE_12229_length_164_cov_0.773913_g12194_i0 | PRJNA1066877 | 12229 | 164 | 0.773913 | 1.26921732 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 292 | 7.41e-75 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g12194 | i0 | 98.78 | 39.8353658536585 | 164 | 2 | 100 | 0 | 1 | 164 | 923164 | 923001 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 6533 | 292 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 10383692 | 10383692 | PRJNA1066877_S_NODE_6189_length_211_cov_0.938272_g6154_i0 | PRJNA1066877 | 6189 | 211 | 0.938272 | 1.97975392 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 377 | 2.6900000000000003e-100 | NTclustered | gi|2320848907|gb|CP107537.1| | 2984843 | g6154 | i0 | 99.048 | 350.39336492891 | 210 | 2 | 99 | 0 | 1 | 210 | 9758 | 9549 | Methylobacterium flocculans strain FF17 plasmid pE, complete sequence | blastn | 73933 | 377 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 11216465 | 11216465 | PRJNA1066877_S_NODE_5809_length_215_cov_2.168675_g5774_i0 | PRJNA1066877 | 5809 | 215 | 2.168675 | 4.66265125 | Stenotrophomonas | 40323 | Bacteria | Bacteria | 398 | 2.1099999999999997e-106 | NTclustered | gi|2235474145|gb|CP080573.1| | 40324 | g5774 | i0 | 100 | 100.981395348837 | 215 | 0 | 100 | 0 | 1 | 215 | 4608380 | 4608594 | Stenotrophomonas maltophilia strain FZD2 chromosome, complete genome | blastn | 21711 | 398 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas maltophilia | ||
| 11658888 | 11658888 | PRJNA1066877_S_NODE_12150_length_164_cov_0.886957_g12115_i0 | PRJNA1066877 | 12150 | 164 | 0.886957 | 1.45460948 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 270 | 3.4699999999999992e-68 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g12115 | i0 | 96.364 | 1.00609756097561 | 165 | 5 | 100 | 1 | 1 | 164 | 4563631 | 4563467 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 165 | 270 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 12491800 | 12491800 | PRJNA1066877_S_NODE_11910_length_165_cov_0.879310_g11875_i0 | PRJNA1066877 | 11910 | 165 | 0.87931 | 1.4508615 | Stenotrophomonas | 40323 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|2235474145|gb|CP080573.1| | 40324 | g11875 | i0 | 100 | 14.9878787878788 | 165 | 0 | 100 | 0 | 1 | 165 | 4487963 | 4488127 | Stenotrophomonas maltophilia strain FZD2 chromosome, complete genome | blastn | 2473 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas maltophilia | ||
| 12491940 | 12491940 | PRJNA1066877_S_NODE_5790_length_216_cov_0.916168_g5755_i0 | PRJNA1066877 | 5790 | 216 | 0.916168 | 1.97892288 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 291 | 3.709999999999999e-74 | NTclustered | gi|2798691846|gb|CP166923.2| | 301 | g5755 | i0 | 98.773 | 118.092592592593 | 163 | 2 | 75 | 0 | 1 | 163 | 1098014 | 1097852 | Ectopseudomonas oleovorans strain ERA chromosome, complete genome | blastn | 25508 | 291 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas oleovorans | ||
| 12934062 | 12934062 | PRJNA1066877_S_NODE_12431_length_163_cov_0.894737_g12396_i0 | PRJNA1066877 | 12431 | 163 | 0.894737 | 1.45842131 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g12396 | i0 | 100 | 16.558282208589 | 163 | 0 | 100 | 0 | 1 | 163 | 357900 | 358062 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 2699 | 302 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 12934192 | 12934192 | PRJNA1066877_S_NODE_7211_length_199_cov_1.973333_g7176_i0 | PRJNA1066877 | 7211 | 199 | 1.973333 | 3.92693267 | Vibrio furnissii | 29494 | Bacteria | Bacteria | 361 | 2.5299999999999998e-95 | NTclustered | gi|2522625247|gb|CP128203.1| | 29494 | g7176 | i0 | 99.495 | 105.201005025126 | 198 | 1 | 99 | 0 | 2 | 199 | 663 | 860 | Vibrio furnissii strain VFBJ07 plasmid pVFBJ07-2, complete sequence | blastn | 20935 | 361 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio furnissii | ||
| 13766416 | 13766416 | PRJNA1066877_S_NODE_7091_length_201_cov_0.907895_g7056_i0 | PRJNA1066877 | 7091 | 201 | 0.907895 | 1.82486895 | Pseudomonas | 286 | Bacteria | Bacteria | 331 | 2.01e-86 | NTclustered | gi|2559173955|gb|CP117447.1| | 2738126 | g7056 | i0 | 97.917 | 65.4378109452736 | 192 | 2 | 100 | 2 | 11 | 201 | 1985999 | 1986189 | Pseudomonas sp. FP215 chromosome, complete genome | blastn | 13153 | 331 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. FP215 | ||
| 14209008 | 14209008 | PRJNA1066877_S_NODE_12732_length_162_cov_0.902655_g12697_i0 | PRJNA1066877 | 12732 | 162 | 0.902655 | 1.4623011 | Methylobacterium brachiatum | 269660 | Bacteria | Bacteria | 255 | 9.570000000000001e-64 | NTclustered | gi|1498425080|gb|CP033231.1| | 269660 | g12697 | i0 | 95.597 | 18.7160493827161 | 159 | 7 | 98 | 0 | 1 | 159 | 2462559 | 2462717 | Methylobacterium brachiatum strain TX0642 chromosome | blastn | 3032 | 255 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium brachiatum | ||
| 15483087 | 15483087 | PRJNA1066877_S_NODE_12793_length_161_cov_1.758929_g12758_i0 | PRJNA1066877 | 12793 | 161 | 1.758929 | 2.83187569 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 287 | 3.37e-73 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g12758 | i0 | 98.758 | 17.8198757763975 | 161 | 2 | 100 | 0 | 1 | 161 | 5070152 | 5069992 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 2869 | 287 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 17590689 | 17590689 | PRJNA1066877_S_NODE_11374_length_167_cov_0.864407_g11339_i0 | PRJNA1066877 | 11374 | 167 | 0.864407 | 1.44355969 | Delftia | 80865 | Bacteria | Bacteria | 309 | 7.53e-80 | NTclustered | gi|2840751852|gb|CP171815.1| | 180282 | g11339 | i0 | 100 | 30.9281437125749 | 167 | 0 | 100 | 0 | 1 | 167 | 560420 | 560254 | Delftia tsuruhatensis strain B7 chromosome, complete genome | blastn | 5165 | 309 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Delftia | Delftia tsuruhatensis | ||
| 17590888 | 17590888 | PRJNA1066877_S_NODE_834_length_458_cov_1.669927_g800_i0 | PRJNA1066877 | 834 | 458 | 1.669927 | 7.64826566 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 830 | 0 | NTclustered | gi|1539751175|emb|LR134290.1| | 300 | g800 | i0 | 99.345 | 547.971615720524 | 458 | 3 | 100 | 0 | 1 | 458 | 2922314 | 2922771 | Pseudomonas mendocina strain NCTC10897 genome assembly, chromosome: 1 | blastn | 250971 | 835 | 0.994011976047904 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas mendocina | ||
| 18864527 | 18864527 | PRJNA1066877_S_NODE_2515_length_295_cov_1.528455_g2480_i0 | PRJNA1066877 | 2515 | 295 | 1.528455 | 4.50894225 | Acidovorax | 12916 | Bacteria | Bacteria | 540 | 4.79e-149 | NTclustered | gi|2442619374|gb|CP117193.1| | 80878 | g2480 | i0 | 99.661 | 280.294915254237 | 295 | 1 | 100 | 0 | 1 | 295 | 325421 | 325715 | Acidovorax temperans strain LMJ chromosome, complete genome | blastn | 82687 | 540 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax temperans | ||
| 20581394 | 20581394 | PRJNA1066877_S_NODE_12957_length_161_cov_0.910714_g12922_i0 | PRJNA1066877 | 12957 | 161 | 0.910714 | 1.46624954 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 287 | 3.37e-73 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g12922 | i0 | 98.758 | 1 | 161 | 2 | 100 | 0 | 1 | 161 | 50716 | 50876 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 161 | 287 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 21415076 | 21415076 | PRJNA1066877_S_NODE_5257_length_224_cov_1.114286_g5222_i0 | PRJNA1066877 | 5257 | 224 | 1.114286 | 2.49600064 | root | 1 | Root_unresolved | Root_unresolved | 409 | 1.03e-109 | NTclustered | gi|1210890823|gb|MF157411.1| | 562 | g5222 | i0 | 99.554 | 90.2366071428571 | 224 | 1 | 100 | 0 | 1 | 224 | 2437 | 2660 | Escherichia coli strain EC1000 plasmid pCR2, complete sequence | blastn | 20213 | 409 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 21415104 | 21415104 | PRJNA1066877_S_NODE_6837_length_203_cov_1.655844_g6802_i0 | PRJNA1066877 | 6837 | 203 | 1.655844 | 3.36136332 | root | 1 | Root_unresolved | Root_unresolved | 370 | 4.3e-98 | NTclustered | gi|1210890823|gb|MF157411.1| | 562 | g6802 | i0 | 99.507 | 99.5073891625616 | 203 | 1 | 100 | 0 | 1 | 203 | 2881 | 2679 | Escherichia coli strain EC1000 plasmid pCR2, complete sequence | blastn | 20200 | 370 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 23132718 | 23132718 | PRJNA1066877_S_NODE_6119_length_212_cov_0.926380_g6084_i0 | PRJNA1066877 | 6119 | 212 | 0.92638 | 1.9639256 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 392 | 9.67e-105 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g6084 | i0 | 100 | 9.57075471698113 | 212 | 0 | 100 | 0 | 1 | 212 | 4879774 | 4879563 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 2029 | 392 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 23965314 | 23965314 | PRJNA1066877_S_NODE_10879_length_170_cov_1.264463_g10844_i0 | PRJNA1066877 | 10879 | 170 | 1.264463 | 2.1495871 | Bacteria | 2 | Bacteria | Bacteria | 315 | 1.64e-81 | NTclustered | gi|959225436|emb|LN899825.1| | 305 | g10844 | i0 | 100 | 50 | 170 | 0 | 100 | 0 | 1 | 170 | 5706548 | 5706717 | Ralstonia solanacearum genome assembly 9 genomes, chromosome : VII | blastn | 8500 | 315 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia solanacearum | ||
| 24406229 | 24406229 | PRJNA1066877_S_NODE_11940_length_165_cov_0.879310_g11905_i0 | PRJNA1066877 | 11940 | 165 | 0.87931 | 1.4508615 | Methylobacterium brachiatum | 269660 | Bacteria | Bacteria | 300 | 4.46e-77 | NTclustered | gi|1498425080|gb|CP033231.1| | 269660 | g11905 | i0 | 99.394 | 58.3939393939394 | 165 | 1 | 100 | 0 | 1 | 165 | 4982468 | 4982632 | Methylobacterium brachiatum strain TX0642 chromosome | blastn | 9635 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium brachiatum | ||
| 24406246 | 24406246 | PRJNA1066877_S_NODE_12460_length_163_cov_0.894737_g12425_i0 | PRJNA1066877 | 12460 | 163 | 0.894737 | 1.45842131 | Methylobacterium sp. 260 | 768323 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|300862471|emb|FN869504.1| | 768323 | g12425 | i0 | 100 | 39.840490797546 | 163 | 0 | 100 | 0 | 1 | 163 | 427 | 265 | Methylobacterium sp. 260 partial 16S rRNA gene, ITS1 and partial 23S rRNA gene, strain 260 | blastn | 6494 | 302 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium sp. 260 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;