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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA1065838" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1065838 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
180168 180168 PRJNA1065838_S_NODE_3981_length_358_cov_2.019417_g3879_i0 PRJNA1065838 3981 358 2.019417 7.22951286 Pseudoloma neurophilia 146866 Fungi Fungi 651 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g3879 i0 99.441 98.854748603352 358 2 100 0 1 358 840 1197 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 35390 651 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
4006585 4006585 PRJNA1065838_S_NODE_544_length_713_cov_4.638554_g461_i0 PRJNA1065838 544 713 4.638554 33.07289002 Pseudoloma neurophilia 146866 Fungi Fungi 883 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g461 i0 99.792 65.6311360448808 480 1 67 0 212 691 1980 1501 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 46795 883 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
6558086 6558086 PRJNA1065838_S_NODE_5346_length_317_cov_11.850746_g5244_i0 PRJNA1065838 5346 317 11.850746 37.56686482 Pseudoloma neurophilia 146866 Fungi Fungi 553 6.679999999999998e-153   NTclustered gi|11993647|gb|AF322654.1| 146866 g5244 i0 99.668 92.1577287066246 301 1 95 0 17 317 2 302 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 29214 553 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
9940743 9940743 PRJNA1065838_S_NODE_31628_length_169_cov_1.175000_g31526_i0 PRJNA1065838 31628 169 1.175 1.98575 Pleistophoridae 35232 Fungi Fungi 226 7.859999999999997e-55   NTclustered gi|2017842940|gb|MW811106.1| 103445 g31526 i0 95.714 14.6272189349112 140 6 83 0 3 142 1233 1372 Ovipleistophora ovariae isolate 2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2472 226 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Ovipleistophora Ovipleistophora ovariae
11658771 11658771 PRJNA1065838_S_NODE_950_length_597_cov_9.841241_g851_i0 PRJNA1065838 950 597 9.841241 58.75220877 Pseudoloma neurophilia 146866 Fungi Fungi 1088 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g851 i0 99.497 99.2830820770519 597 3 100 0 1 597 278 874 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 59272 1088 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
14208840 14208840 PRJNA1065838_S_NODE_5852_length_306_cov_1.101167_g5750_i0 PRJNA1065838 5852 306 1.101167 3.36957102 Fusasporis stethaprioni 2777717 Fungi Fungi 479 1.1e-130   NTclustered gi|1914073495|gb|MW077214.1| 2777717 g5750 i0 95.114 100.87908496732 307 10 100 4 1 306 1141 839 Fusasporis stethaprioni strain 2018 small subunit ribosomal RNA gene, partial sequence blastn 30869 479 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Fusasporis Fusasporis stethaprioni
16757081 16757081 PRJNA1065838_S_NODE_914_length_604_cov_7.272072_g815_i0 PRJNA1065838 914 604 7.272072 43.92331488 Fusasporis stethaprioni 2777717 Fungi Fungi 867 0   NTclustered gi|1914073495|gb|MW077214.1| 2777717 g815 i0 92.562 100.054635761589 605 44 100 1 1 604 857 253 Fusasporis stethaprioni strain 2018 small subunit ribosomal RNA gene, partial sequence blastn 60433 867 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Fusasporis Fusasporis stethaprioni
18031644 18031644 PRJNA1065838_S_NODE_10875_length_239_cov_1.915789_g10773_i0 PRJNA1065838 10875 239 1.915789 4.57873571 Pleistophora mulleri 249366 Fungi Fungi 355 1.46e-93   NTclustered gi|134147422|gb|EF119339.1| 249366 g10773 i0 97.585 47.2887029288703 207 5 87 0 1 207 3048 2842 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 11302 355 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
22689562 22689562 PRJNA1065838_S_NODE_5398_length_316_cov_3.078652_g5296_i0 PRJNA1065838 5398 316 3.078652 9.72854032 Glugea 36736 Fungi Fungi 433 9.04e-117   NTclustered gi|562115|gb|U15987.1|GAU15987 36737 g5296 i0 92.739 92.873417721519 303 17 95 5 2 300 303 2 Glugea atherinae small subunit ribosomal RNA gene blastn 29348 433 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Glugea Glugea atherinae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;