RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1063685" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1063685 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
179697 179697 PRJNA1063685_S_NODE_46161_length_337_cov_2.212121_g45618_i0 PRJNA1063685 46161 337 2.212121 7.45484777 Cochlonema odontosperma 2082957 Fungi Fungi 492 1.58e-134   NTclustered gi|2130025295|gb|OL396569.1| 2082957 g45618 i0 94.654 32.1661721068249 318 16 94 1 1 317 841 524 Cochlonema odontosperma isolate E1 large subunit ribosomal RNA gene, partial sequence blastn 10840 492 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Cochlonemataceae Cochlonema Cochlonema odontosperma
4006331 4006331 PRJNA1063685_S_NODE_77924_length_227_cov_5.305195_g77381_i0 PRJNA1063685 77924 227 5.305195 12.04279265 Entomophaga aulicae 39303 Fungi Fungi 89.8 1.54e-13   NTclustered gi|1373048|gb|U35394.1|EAU35394 39303 g77381 i0 83.673 32.4405286343612 98 12 42 3 58 152 3579 3675 Entomophaga aulicae 18S, ITS-1, 5.8S, ITS-2, and 25S ribosomal RNA genes blastn 7364 89.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophaga Entomophaga aulicae
16314482 16314482 PRJNA1063685_S_NODE_58813_length_284_cov_3.028436_g58270_i0 PRJNA1063685 58813 284 3.028436 8.60075824 Opisthokonta 33154 Fungi Fungi 141 5.44e-29   NTclustered gi|2489628978|gb|OQ831924.1| 42210 g58270 i0 90.566 40.6478873239437 106 10 37 0 26 131 1558 1663 Zoophthora radicans strain ATCC 208865 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11544 141 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Zoophthora Zoophthora radicans
20580735 20580735 PRJNA1063685_S_NODE_44557_length_344_cov_22.313653_g44014_i0 PRJNA1063685 44557 344 22.313653 76.75896632 Kickxella alabastrina 61397 Fungi Fungi 211 5.07e-50   NTclustered gi|2323999502|ref|XM_051534073.1| 61397 g44014 i0 81.203 3.43895348837209 266 46 77 4 49 312 146 409 Kickxella alabastrina putative RPL43B-60S large subunit ribosomal protein (BX661DRAFT_175458), mRNA blastn 1183 211 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;