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contig_metadata

24 rows where analysis = "blastn", bioproject = "PRJNA1063685" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 24 ✖

tax_clade 1

bioproject 1

  • PRJNA1063685 · 24 ✖

analysis 1

  • blastn · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5282362 5282362 PRJNA1063685_S_NODE_37165_length_383_cov_11.445161_g36622_i0 PRJNA1063685 37165 383 11.445161 43.83496663 Euplotes cf. encysticus 2994703 SAR_Eukaryotes SAR_Eukaryotes 660 0   NTclustered gi|2328859141|gb|OP828540.1| 2994703 g36622 i0 100 87.8407310704961 357 0 93 0 1 357 767 411 Euplotes cf. encysticus isolate LCY2016040803 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 33643 660 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes cf. encysticus
5282547 5282547 PRJNA1063685_S_NODE_57165_length_290_cov_2.894009_g56622_i0 PRJNA1063685 57165 290 2.894009 8.3926261 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 497 2.8699999999999993e-136   NTclustered gi|10782|emb|X54004.1| 5908 g56622 i0 97.586 49.2137931034483 290 7 100 0 1 290 2189 1900 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 14272 497 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
5282671 5282671 PRJNA1063685_S_NODE_74625_length_240_cov_5.269461_g74082_i0 PRJNA1063685 74625 240 5.269461 12.6467064 Leptopharynx costatus 502090 SAR_Eukaryotes SAR_Eukaryotes 351 1.9e-92   NTclustered gi|558697263|gb|KC832958.1| 502090 g74082 i0 99.482 60.8708333333333 193 1 80 0 1 193 193 1 Leptopharynx costatus 28S ribosomal RNA gene, partial sequence blastn 14609 351 1 Eukaryota Sar   Ciliophora Nassophorea Microthoracida Microthoracidae Leptopharynx Leptopharynx costatus
6115372 6115372 PRJNA1063685_S_NODE_80765_length_199_cov_12.468254_g80222_i0 PRJNA1063685 80765 199 12.468254 24.81182546 Euplotes 5935 SAR_Eukaryotes SAR_Eukaryotes 368 1.51e-97   NTclustered gi|1233819925|gb|KX516617.1| 440145 g80222 i0 100 100.29648241206 199 0 100 0 1 199 1506 1308 Euplotes encysticus isolate B555 large subunit ribosomal RNA gene, partial sequence blastn 19959 368 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes encysticus
6557844 6557844 PRJNA1063685_S_NODE_79946_length_208_cov_9.696296_g79403_i0 PRJNA1063685 79946 208 9.696296 20.16829568 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 180 8.01e-41   NTclustered gi|2651357788|gb|PP174303.1| 41631 g79403 i0 85.632 12.7259615384615 174 21 82 3 1 170 3155 3328 Colpoda sp. isolate CIL1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2647 180 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
7832093 7832093 PRJNA1063685_S_NODE_25867_length_459_cov_4.461140_g25326_i0 PRJNA1063685 25867 459 4.46114 20.4766326 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 93.5 2.62e-14   NTclustered gi|829195198|ref|XM_001025389.3| 312017 g25326 i0 87.5 0.357298474945534 80 10 17 0 23 102 371 450 Tetrahymena thermophila SB210 40S ribosomal protein S14 partial mRNA blastn 164 93.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
7832250 7832250 PRJNA1063685_S_NODE_41487_length_360_cov_7.233449_g40944_i0 PRJNA1063685 41487 360 7.233449 26.0404164 Metopus es 392813 SAR_Eukaryotes SAR_Eukaryotes 545 1.2799999999999995e-150   NTclustered gi|110645073|gb|DQ665935.1| 392813 g40944 i0 95.846 91.65 337 14 94 0 24 360 393 729 Metopus es clone 1 actin gene, partial cds; macronuclear blastn 32994 545 1 Eukaryota Sar   Ciliophora Armophorea Metopida Metopidae Metopus Metopus es
9106937 9106937 PRJNA1063685_S_NODE_13088_length_585_cov_9.777344_g12568_i0 PRJNA1063685 13088 585 9.777344 57.1974624 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 237 1.49e-57   NTclustered gi|2072713056|gb|MH608212.2| 266149 g12568 i0 79.758 11.191452991453 331 63 56 3 257 585 5951 5623 Pseudocohnilembus persalinus mitochondrion blastn 6547 237 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
9939959 9939959 PRJNA1063685_S_NODE_17008_length_539_cov_29.978541_g16476_i0 PRJNA1063685 17008 539 29.978541 161.58433599 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 929 0   NTclustered gi|1584439067|gb|MK579316.1| 5902 g16476 i0 99.225 94.3228200371058 516 2 96 2 11 526 10 523 Tetrahymena mimbres isolate XZ9 small subunit ribosomal RNA gene, partial sequence blastn 50840 935 0.993582887700535 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena mimbres
11215394 11215394 PRJNA1063685_S_NODE_42269_length_356_cov_6.685512_g41726_i0 PRJNA1063685 42269 356 6.685512 23.80042272 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 538 2.1199999999999994e-148   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g41726 i0 96.885 19.626404494382 321 10 90 0 24 344 1173 1493 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 6987 538 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
11657876 11657876 PRJNA1063685_S_NODE_12690_length_590_cov_24.013540_g12172_i0 PRJNA1063685 12690 590 24.01354 141.679886 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 551 4.719999999999998e-152   NTclustered gi|2651357788|gb|PP174303.1| 41631 g12172 i0 86.398 87.471186440678 522 49 85 15 1 504 3327 3844 Colpoda sp. isolate CIL1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 51608 551 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
12933205 12933205 PRJNA1063685_S_NODE_24651_length_468_cov_33.283544_g24111_i0 PRJNA1063685 24651 468 33.283544 155.76698592 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 780 0   NTclustered gi|512134943|gb|JX178902.1| 1295638 g24111 i0 98.42 89.4273504273504 443 7 95 0 24 466 960 1402 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 41852 780 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
15039868 15039868 PRJNA1063685_S_NODE_76252_length_234_cov_2.490683_g75709_i0 PRJNA1063685 76252 234 2.490683 5.82819822 Cyclidium 35099 SAR_Eukaryotes SAR_Eukaryotes 433 6.41e-117   NTclustered gi|1150566195|gb|KX578216.1| 35100 g75709 i0 100 99.5769230769231 234 0 100 0 1 234 343 576 Cyclidium glaucoma isolate SUVRK07 18S ribosomal RNA gene, partial sequence blastn 23301 433 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Cyclidiidae Cyclidium Cyclidium glaucoma
16314352 16314352 PRJNA1063685_S_NODE_36833_length_385_cov_6.612179_g36290_i0 PRJNA1063685 36833 385 6.612179 25.45688915 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 689 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g36290 i0 98.961 23.7116883116883 385 4 100 0 1 385 1489 1873 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 9129 689 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
16314394 16314394 PRJNA1063685_S_NODE_43373_length_350_cov_12.259928_g42830_i0 PRJNA1063685 43373 350 12.259928 42.909748 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 595 1.22e-165   NTclustered gi|2459327249|gb|OQ626843.1| 5908 g42830 i0 99.39 93.0714285714286 328 2 94 0 23 350 459 786 Tetrahymena pyriformis isolate LLH20220320 pop variant pop1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 32575 595 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
16756688 16756688 PRJNA1063685_S_NODE_58954_length_283_cov_17.504762_g58411_i0 PRJNA1063685 58954 283 17.504762 49.53847646 Metopus es 392813 SAR_Eukaryotes SAR_Eukaryotes 459 1.3199999999999998e-124   NTclustered gi|110645073|gb|DQ665935.1| 392813 g58411 i0 96.085 101.618374558304 281 11 99 0 3 283 194 474 Metopus es clone 1 actin gene, partial cds; macronuclear blastn 28758 459 1 Eukaryota Sar   Ciliophora Armophorea Metopida Metopidae Metopus Metopus es
18031259 18031259 PRJNA1063685_S_NODE_35915_length_390_cov_43.305994_g35372_i0 PRJNA1063685 35915 390 43.305994 168.8933766 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 549 1.0799999999999997e-151   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g35372 i0 94.413 41.7179487179487 358 18 92 2 7 363 357 1 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 16270 549 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
18031341 18031341 PRJNA1063685_S_NODE_45035_length_342_cov_4.241636_g44492_i0 PRJNA1063685 45035 342 4.241636 14.50639512 Cyclidium glaucoma 35100 SAR_Eukaryotes SAR_Eukaryotes 575 1.5499999999999994e-159   NTclustered gi|111035915|emb|AJ781092.1| 35100 g44492 i0 98.471 93.9473684210526 327 3 95 2 17 342 1 326 Cyclidium glaucoma partial 23S rRNA gene, strain ATCC 30701 blastn 32130 575 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Cyclidiidae Cyclidium Cyclidium glaucoma
20138527 20138527 PRJNA1063685_S_NODE_62656_length_271_cov_2.934343_g62113_i0 PRJNA1063685 62656 271 2.934343 7.95206953 Euplotes 5935 SAR_Eukaryotes SAR_Eukaryotes 484 2.07e-132   NTclustered gi|1233819925|gb|KX516617.1| 440145 g62113 i0 98.893 101.749077490775 271 3 100 0 1 271 969 1239 Euplotes encysticus isolate B555 large subunit ribosomal RNA gene, partial sequence blastn 27574 484 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes encysticus
20580593 20580593 PRJNA1063685_S_NODE_31617_length_417_cov_6.104651_g31075_i0 PRJNA1063685 31617 417 6.104651 25.45639467 Aristerostoma sp. Assp1 767759 SAR_Eukaryotes SAR_Eukaryotes 361 5.8699999999999996e-95   NTclustered gi|296939552|gb|HM246398.1| 767759 g31075 i0 83.59 16.4148681055156 390 58 93 6 1 388 386 1 Aristerostoma sp. Assp1 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 6845 361 1 Eukaryota Sar   Ciliophora Colpodea Cyrtolophosidida Cyrtolophosididae Aristerostoma Aristerostoma sp. Assp1
20580913 20580913 PRJNA1063685_S_NODE_67197_length_257_cov_12.315217_g66654_i0 PRJNA1063685 67197 257 12.315217 31.65010769 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 427 3.32e-115   NTclustered gi|10782|emb|X54004.1| 5908 g66654 i0 99.574 86.5252918287938 235 0 91 1 1 234 2782 2548 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 22237 427 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
22688705 22688705 PRJNA1063685_S_NODE_29238_length_434_cov_7.869806_g28696_i0 PRJNA1063685 29238 434 7.869806 34.15495804 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 154 1.12e-32   NTclustered gi|2643596954|gb|PP067626.1| 5987 g28696 i0 90.517 26.6036866359447 116 11 27 0 193 308 3847 3732 Isotricha prostoma isolate 03.MDA03 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 11546 154 1 Eukaryota Sar   Ciliophora Litostomatea Vestibuliferida Isotrichidae Isotricha Isotricha prostoma
23131934 23131934 PRJNA1063685_S_NODE_44679_length_344_cov_2.568266_g44136_i0 PRJNA1063685 44679 344 2.568266 8.83483504 Colpoda inflata 5980 SAR_Eukaryotes SAR_Eukaryotes 547 3.399999999999999e-151   NTclustered gi|174166|gb|M98367.1|CLPRRLSA 5980 g44136 i0 96.636 86.1744186046512 327 10 95 1 1 327 329 4 Colpoda inflata large subunit ribosomal RNA, 5' end blastn 29644 547 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda inflata
25238347 25238347 PRJNA1063685_S_NODE_57900_length_287_cov_5.724299_g57357_i0 PRJNA1063685 57900 287 5.724299 16.42873813 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 520 6.049999999999999e-143   NTclustered gi|2651357791|gb|PP174306.1| 41631 g57357 i0 99.303 98.1149825783972 287 2 100 0 1 287 1771 2057 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 28159 520 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;