contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA1063685" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1454150 | 1454150 | PRJNA1063685_S_NODE_25022_length_466_cov_3.094148_g24482_i0 | PRJNA1063685 | 25022 | 466 | 3.094148 | 14.41872968 | Pseudobdellovibrio sp. HCB154 | 3386277 | Bacteria | Bacteria | 54.7 | 0.013 | NTclustered | gi|2872995934|gb|CP176530.1| | 3386277 | g24482 | i0 | 96.97 | 0.130901287553648 | 33 | 0 | 7 | 1 | 174 | 206 | 2446139 | 2446170 | Pseudobdellovibrio sp. HCB154 chromosome, complete genome | blastn | 61 | 54.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. HCB154 | ||
| 2730002 | 2730002 | PRJNA1063685_S_NODE_28443_length_440_cov_7.743869_g27902_i0 | PRJNA1063685 | 28443 | 440 | 7.743869 | 34.0730236 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 564 | 4.419999999999999e-156 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g27902 | i0 | 91.872 | 24.2772727272727 | 406 | 30 | 92 | 3 | 24 | 428 | 1293672 | 1294075 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 10682 | 564 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 6557390 | 6557390 | PRJNA1063685_S_NODE_23926_length_474_cov_21.790524_g23386_i0 | PRJNA1063685 | 23926 | 474 | 21.790524 | 103.28708376 | Pigmentibacter sp. JX0631 | 2976982 | Bacteria | Bacteria | 329 | 1.9e-85 | NTclustered | gi|2496589869|gb|CP123622.1| | 2976982 | g23386 | i0 | 80.31 | 140.246835443038 | 452 | 75 | 94 | 14 | 30 | 474 | 369795 | 369351 | Pigmentibacter sp. JX0631 chromosome, complete genome | blastn | 66477 | 329 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Pigmentibacter | Pigmentibacter sp. JX0631 | ||
| 8665058 | 8665058 | PRJNA1063685_S_NODE_26947_length_451_cov_7.645503_g26406_i0 | PRJNA1063685 | 26947 | 451 | 7.645503 | 34.48121853 | Pseudobdellovibrionaceae | 213483 | Bacteria | Bacteria | 737 | 0 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g26406 | i0 | 97.674 | 151.541019955654 | 430 | 8 | 95 | 1 | 24 | 451 | 575 | 1004 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 68345 | 739 | 0.997293640054127 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 9940031 | 9940031 | PRJNA1063685_S_NODE_25628_length_461_cov_5.030928_g25088_i0 | PRJNA1063685 | 25628 | 461 | 5.030928 | 23.19257808 | Bdellovibrio | 958 | Bacteria | Bacteria | 739 | 0 | NTclustered | gi|485099167|ref|NR_102561.1| | 959 | g25088 | i0 | 97.039 | 90.4902386117137 | 439 | 13 | 95 | 0 | 1 | 439 | 1590 | 1152 | Bdellovibrio bacteriovorus strain Tiberius 23S ribosomal RNA gene, complete sequence | blastn | 41716 | 739 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 11658383 | 11658383 | PRJNA1063685_S_NODE_64870_length_264_cov_4.109948_g64327_i0 | PRJNA1063685 | 64870 | 264 | 4.109948 | 10.85026272 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 357 | 4.5599999999999997e-94 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g64327 | i0 | 93.361 | 30.5606060606061 | 241 | 16 | 91 | 0 | 1 | 241 | 1292686 | 1292446 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 8068 | 357 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 15039513 | 15039513 | PRJNA1063685_S_NODE_22592_length_485_cov_14.434466_g22052_i0 | PRJNA1063685 | 22592 | 485 | 14.434466 | 70.0071601 | Bacteriovorax | 146784 | Bacteria | Bacteria | 837 | 0 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g22052 | i0 | 98.523 | 209.861855670103 | 474 | 7 | 98 | 0 | 1 | 474 | 1660819 | 1660346 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 101783 | 837 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 15039519 | 15039519 | PRJNA1063685_S_NODE_23552_length_477_cov_10.995050_g23012_i0 | PRJNA1063685 | 23552 | 477 | 10.99505 | 52.4463885 | Bdellovibrio | 958 | Bacteria | Bacteria | 344 | 6.839999999999999e-90 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g23012 | i0 | 80.819 | 239.341719077568 | 464 | 68 | 95 | 16 | 1 | 455 | 783542 | 783091 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 114166 | 344 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 16756556 | 16756556 | PRJNA1063685_S_NODE_43414_length_350_cov_5.815884_g42871_i0 | PRJNA1063685 | 43414 | 350 | 5.815884 | 20.355594 | uncultured Bdellovibrio sp. | 239744 | Bacteria | Bacteria | 534 | 2.69e-147 | NTclustered | gi|33521462|gb|AY338169.1| | 239744 | g42871 | i0 | 98.671 | 92.46 | 301 | 4 | 86 | 0 | 50 | 350 | 1 | 301 | Uncultured Bdellovibrio sp. clone M13-72 16S ribosomal RNA gene, partial sequence | blastn | 32361 | 534 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | uncultured Bdellovibrio sp. | ||
| 20138497 | 20138497 | PRJNA1063685_S_NODE_58276_length_286_cov_2.558685_g57733_i0 | PRJNA1063685 | 58276 | 286 | 2.558685 | 7.3178391 | Peredibacter | 263370 | Bacteria | Bacteria | 449 | 8.02e-122 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g57733 | i0 | 96.014 | 117.70979020979 | 276 | 11 | 97 | 0 | 2 | 277 | 510959 | 510684 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 33665 | 451 | 0.995565410199557 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 20138564 | 20138564 | PRJNA1063685_S_NODE_68836_length_253_cov_1.377778_g68293_i0 | PRJNA1063685 | 68836 | 253 | 1.377778 | 3.48577834 | Peredibacter | 263370 | Bacteria | Bacteria | 394 | 3.309999999999999e-105 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g68293 | i0 | 96.25 | 176.537549407115 | 240 | 9 | 95 | 0 | 12 | 251 | 512828 | 513067 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 44664 | 396 | 0.994949494949495 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 23131914 | 23131914 | PRJNA1063685_S_NODE_41699_length_359_cov_4.506993_g41156_i0 | PRJNA1063685 | 41699 | 359 | 4.506993 | 16.18010487 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 580 | 3.51e-161 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g41156 | i0 | 97.917 | 111.289693593315 | 336 | 5 | 93 | 1 | 24 | 357 | 511841 | 512176 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 39953 | 580 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;