RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1063685" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1063685 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4839799 4839799 PRJNA1063685_S_NODE_12684_length_591_cov_2.137066_g12166_i0 PRJNA1063685 12684 591 2.137066 12.63006006 Fimbriimonas 1005038 Bacteria Bacteria 584 4.659999999999998e-162   NTclustered gi|663071213|gb|CP007139.1| 661478 g12166 i0 84.983 15.4957698815567 586 77 98 7 1 582 27940 28518 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 9158 584 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
7832533 7832533 PRJNA1063685_S_NODE_9087_length_643_cov_8.842105_g8578_i0 PRJNA1063685 9087 643 8.842105 56.85473515 Armatimonadetes bacterium Uphvl-Ar2 2004468 Bacteria Bacteria 861 0   NTclustered gi|1199101103|gb|CP021424.1| 2004468 g8578 i0 90.853 157.359253499222 645 55 100 4 1 643 2201314 2201956 Armatimonadetes bacterium Uphvl-Ar2 genome blastn 101182 861 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium Uphvl-Ar2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;