contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA1063685" and tax_phylum = "Acidobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4005955 | 4005955 | PRJNA1063685_S_NODE_29104_length_435_cov_8.295580_g28562_i0 | PRJNA1063685 | 29104 | 435 | 8.29558 | 36.085773 | Bryobacterales bacterium F-183 | 2802972 | Bacteria | Bacteria | 750 | 0 | NTclustered | gi|2131941663|dbj|AP025252.1| | 2802972 | g28562 | i0 | 99.515 | 99.816091954023 | 412 | 2 | 95 | 0 | 24 | 435 | 634227 | 633816 | Bryobacterales bacterium F-183 DNA, nearly complete genome | blastn | 43420 | 750 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacterales bacterium F-183 | ||||
| 4006055 | 4006055 | PRJNA1063685_S_NODE_40004_length_368_cov_5.267797_g39461_i0 | PRJNA1063685 | 40004 | 368 | 5.267797 | 19.38549296 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 536 | 7.92e-148 | NTclustered | gi|339646357|gb|JN038746.1| | 171953 | g39461 | i0 | 95.044 | 90.1983695652174 | 343 | 14 | 93 | 3 | 1 | 342 | 341 | 1 | Uncultured Acidobacteria bacterium clone MP-R75 16S ribosomal RNA gene, partial sequence | blastn | 33193 | 536 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 5282334 | 5282334 | PRJNA1063685_S_NODE_33985_length_402_cov_8.009119_g33443_i0 | PRJNA1063685 | 33985 | 402 | 8.009119 | 32.19665838 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 617 | 3.0299999999999996e-172 | NTclustered | gi|2874254027|emb|OY970352.1| | 171953 | g33443 | i0 | 96.042 | 130.805970149254 | 379 | 15 | 94 | 0 | 1 | 379 | 2365676 | 2366054 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 | blastn | 52584 | 617 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 5282546 | 5282546 | PRJNA1063685_S_NODE_57085_length_290_cov_4.483871_g56542_i0 | PRJNA1063685 | 57085 | 290 | 4.483871 | 13.0032259 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 348 | 3.06e-91 | NTclustered | gi|1958093598|gb|CP065003.1| | 1978231 | g56542 | i0 | 90.875 | 95.551724137931 | 263 | 19 | 90 | 5 | 23 | 282 | 317252 | 317512 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome | blastn | 27710 | 348 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 12933232 | 12933232 | PRJNA1063685_S_NODE_27491_length_447_cov_8.874332_g26950_i0 | PRJNA1063685 | 27491 | 447 | 8.874332 | 39.66826404 | Paludibaculum fermentans | 1473598 | Bacteria | Bacteria | 448 | 4.72e-121 | NTclustered | gi|1929489624|gb|CP063849.1| | 1473598 | g26950 | i0 | 86.19 | 95.662192393736 | 420 | 51 | 93 | 7 | 32 | 447 | 4786514 | 4786098 | Paludibaculum fermentans strain P105 chromosome, complete genome | blastn | 42761 | 448 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Paludibaculum | Paludibaculum fermentans | ||
| 12933257 | 12933257 | PRJNA1063685_S_NODE_30471_length_425_cov_6.125000_g29929_i0 | PRJNA1063685 | 30471 | 425 | 6.125 | 26.03125 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 416 | 1.26e-111 | NTclustered | gi|2874253885|emb|OY970060.1| | 171953 | g29929 | i0 | 84.687 | 118.305882352941 | 431 | 51 | 98 | 11 | 10 | 425 | 4839100 | 4839530 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 | blastn | 50280 | 416 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 12933630 | 12933630 | PRJNA1063685_S_NODE_81011_length_197_cov_4.322581_g80468_i0 | PRJNA1063685 | 81011 | 197 | 4.322581 | 8.51548457 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 198 | 2.07e-46 | NTclustered | gi|2874254108|emb|OY970193.1| | 171953 | g80468 | i0 | 87.079 | 0.903553299492386 | 178 | 20 | 90 | 3 | 1 | 178 | 4472294 | 4472120 | MAG: uncultured Acidobacteriota bacterium isolate MFD09206.bin.1.42 genome assembly, chromosome: 1 | blastn | 178 | 198 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 14208128 | 14208128 | PRJNA1063685_S_NODE_23352_length_479_cov_5.054187_g22812_i0 | PRJNA1063685 | 23352 | 479 | 5.054187 | 24.20955573 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 488 | 2.9999999999999998e-133 | NTclustered | gi|1958085512|gb|CP065000.1| | 1978231 | g22812 | i0 | 86.087 | 103.338204592902 | 460 | 57 | 95 | 5 | 1 | 456 | 3298618 | 3298162 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome | blastn | 49499 | 488 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 14208588 | 14208588 | PRJNA1063685_S_NODE_74892_length_239_cov_4.132530_g74349_i0 | PRJNA1063685 | 74892 | 239 | 4.13253 | 9.8767467 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 172 | 1.58e-38 | NTclustered | gi|2874253744|emb|OY969603.1| | 171953 | g74349 | i0 | 97.98 | 22.7280334728033 | 99 | 2 | 41 | 0 | 118 | 216 | 5803310 | 5803212 | MAG: uncultured Acidobacteriota bacterium isolate MFD01476.bin.c.1 genome assembly, chromosome: 1 | blastn | 5432 | 172 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 16756707 | 16756707 | PRJNA1063685_S_NODE_61274_length_275_cov_7.559406_g60731_i0 | PRJNA1063685 | 61274 | 275 | 7.559406 | 20.7883665 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 383 | 7.89e-102 | NTclustered | gi|2874253677|emb|OY969111.1| | 171953 | g60731 | i0 | 93.774 | 429.494545454545 | 257 | 13 | 93 | 3 | 21 | 275 | 715483 | 715228 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.3 genome assembly, chromosome: 1 | blastn | 118111 | 383 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 21856297 | 21856297 | PRJNA1063685_S_NODE_20858_length_501_cov_30.030374_g20320_i0 | PRJNA1063685 | 20858 | 501 | 30.030374 | 150.45217374 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 558 | 2.3699999999999995e-154 | NTclustered | gi|2621707050|emb|OY764903.1| | 2212468 | g20320 | i0 | 88.72 | 96.8403193612775 | 461 | 47 | 91 | 4 | 34 | 490 | 3558657 | 3558198 | MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 | blastn | 48517 | 558 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 21856350 | 21856350 | PRJNA1063685_S_NODE_27178_length_449_cov_15.630319_g26637_i0 | PRJNA1063685 | 27178 | 449 | 15.630319 | 70.18013231 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 697 | 0 | NTclustered | gi|338181099|gb|JF981607.1| | 171953 | g26637 | i0 | 98.25 | 93.3184855233853 | 400 | 4 | 88 | 3 | 7 | 403 | 400 | 1 | Uncultured Acidobacteria bacterium clone Upland_8_884 16S ribosomal RNA gene, partial sequence | blastn | 41900 | 697 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 21856586 | 21856586 | PRJNA1063685_S_NODE_57198_length_290_cov_2.437788_g56655_i0 | PRJNA1063685 | 57198 | 290 | 2.437788 | 7.0695852 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 394 | 3.87e-105 | NTclustered | gi|1958098837|gb|CP065005.1| | 1978231 | g56655 | i0 | 91.844 | 260.244827586207 | 282 | 23 | 97 | 0 | 9 | 290 | 4648590 | 4648871 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome | blastn | 75471 | 394 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 21856675 | 21856675 | PRJNA1063685_S_NODE_6998_length_683_cov_5.624590_g6510_i0 | PRJNA1063685 | 6998 | 683 | 5.62459 | 38.4159497 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 933 | 0 | NTclustered | gi|1958085512|gb|CP065000.1| | 1978231 | g6510 | i0 | 91.317 | 178.360175695461 | 691 | 48 | 100 | 12 | 1 | 683 | 3299891 | 3299205 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome | blastn | 121820 | 933 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 23131937 | 23131937 | PRJNA1063685_S_NODE_45239_length_341_cov_4.141791_g44696_i0 | PRJNA1063685 | 45239 | 341 | 4.1417909999999996 | 14.12350731 | Luteitalea pratensis | 1855912 | Bacteria | Bacteria | 54.7 | 0.009 | NTclustered | gi|1016914409|gb|CP015136.1| | 1855912 | g44696 | i0 | 96.875 | 0.668621700879765 | 32 | 1 | 9 | 0 | 195 | 226 | 2559642 | 2559673 | Luteitalea pratensis strain DSM 100886 chromosome, complete genome | blastn | 228 | 54.7 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacteraceae | Luteitalea | Luteitalea pratensis | ||
| 25238079 | 25238079 | PRJNA1063685_S_NODE_1900_length_918_cov_10.998817_g1577_i0 | PRJNA1063685 | 1900 | 918 | 10.998817 | 100.96914006 | Bacteria | 2 | Bacteria | Bacteria | 907 | 0 | NTclustered | gi|76574291|gb|DQ139439.1| | 171953 | g1577 | i0 | 85.033 | 84.3758169934641 | 902 | 124 | 97 | 11 | 24 | 918 | 625 | 1522 | Uncultured Acidobacteria bacterium clone CAL9 23S ribosomal RNA gene, partial sequence | blastn | 77457 | 907 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;