RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1061474" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1061474 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2729306 2729306 PRJNA1061474_P_NODE_46263_length_251_cov_0.865169_g46017_i0 PRJNA1061474 46263 251 0.865169 2.17157419 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 163 1.01e-35   NTclustered gi|2874253703|emb|OY969429.1| 3107663 g46017 i0 80.976 21.4143426294821 205 39 82 0 46 250 1586828 1586624 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD05705.bin.c.4 genome assembly, chromosome: 1 blastn 5375 163 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
9106607 9106607 PRJNA1061474_P_NODE_55128_length_243_cov_0.905882_g54882_i0 PRJNA1061474 55128 243 0.905882 2.20129326 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 233 7.289999999999999e-57   NTclustered gi|2874253824|emb|OY969808.1| 3107663 g54882 i0 87.562 0.827160493827161 201 25 83 0 43 243 940755 940555 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.1 genome assembly, chromosome: 1 blastn 201 233 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;