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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA1061474" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1061474 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
178850 178850 PRJNA1061474_P_NODE_45401_length_251_cov_0.865169_g45155_i0 PRJNA1061474 45401 251 0.865169 2.17157419 Opitutus terrae 107709 Bacteria Bacteria 331 2.6100000000000006e-86   NTclustered gi|177839040|gb|CP001032.1| 452637 g45155 i0 90.438 3.88446215139442 251 24 100 0 1 251 1312130 1312380 Opitutus terrae PB90-1, complete genome blastn 975 331 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus terrae
2729501 2729501 PRJNA1061474_P_NODE_53903_length_244_cov_0.900585_g53657_i0 PRJNA1061474 53903 244 0.900585 2.1974274 Opitutus terrae 107709 Bacteria Bacteria 239 1.57e-58   NTclustered gi|177839040|gb|CP001032.1| 452637 g53657 i0 84.81 1.94262295081967 237 36 97 0 8 244 555781 555545 Opitutus terrae PB90-1, complete genome blastn 474 239 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus terrae
2729533 2729533 PRJNA1061474_P_NODE_54783_length_243_cov_0.905882_g54537_i0 PRJNA1061474 54783 243 0.905882 2.20129326 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 183 7.44e-42   NTclustered gi|2874253768|emb|OY969715.1| 412056 g54537 i0 80.579 2.11522633744856 242 44 99 3 1 241 1399082 1398843 MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 blastn 514 183 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
6556851 6556851 PRJNA1061474_P_NODE_50026_length_247_cov_0.885057_g49780_i0 PRJNA1061474 50026 247 0.885057 2.18609079 Verrucomicrobium sp. GAS474 1882831 Bacteria Bacteria 159 1.28e-34   NTclustered gi|1085974270|emb|LT629781.1| 1882831 g49780 i0 79.31 17.1457489878543 232 44 93 4 3 232 907325 907096 Verrucomicrobiaceae bacterium GAS474 genome assembly, chromosome: I blastn 4235 159 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Verrucomicrobium Verrucomicrobium sp. GAS474
6556887 6556887 PRJNA1061474_P_NODE_51526_length_246_cov_0.890173_g51280_i0 PRJNA1061474 51526 246 0.890173 2.18982558 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 220 5.76e-53   NTclustered gi|2874253952|emb|OY970277.1| 412056 g51280 i0 83.065 61.4634146341463 248 37 99 5 1 245 3416394 3416149 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 blastn 15120 220 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
11215124 11215124 PRJNA1061474_P_NODE_57649_length_241_cov_0.916667_g57403_i0 PRJNA1061474 57649 241 0.916667 2.20916747 Verrucomicrobiota 74201 Bacteria Bacteria 279 9.14e-71   NTclustered gi|2874254065|emb|OY970130.1| 412056 g57403 i0 87.705 4.8298755186722 244 24 100 5 1 241 2231844 2232084 MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 blastn 1164 281 0.99288256227758 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
11657385 11657385 PRJNA1061474_P_NODE_47710_length_249_cov_0.875000_g47464_i0 PRJNA1061474 47710 249 0.875 2.17875 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 167 7.709999999999999e-37   NTclustered gi|2874253779|emb|OY969763.1| 412056 g47464 i0 100 33.5301204819277 90 0 36 0 53 142 5401604 5401515 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 blastn 8349 167 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
11657635 11657635 PRJNA1061474_P_NODE_57610_length_241_cov_0.916667_g57364_i0 PRJNA1061474 57610 241 0.916667 2.20916747 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 182 2.65e-41   NTclustered gi|2874254065|emb|OY970130.1| 412056 g57364 i0 81.9 1.67634854771784 221 34 90 6 1 217 947938 947720 MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 blastn 404 182 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
15481909 15481909 PRJNA1061474_P_NODE_58073_length_241_cov_0.916667_g57827_i0 PRJNA1061474 58073 241 0.916667 2.20916747 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 67.6 7.75e-7   NTclustered gi|2874253793|emb|OY969777.1| 412056 g57827 i0 95.238 6.94605809128631 42 2 17 0 200 241 2455969 2456010 MAG: uncultured Verrucomicrobiae bacterium isolate MFD01689.bin.c.1 genome assembly, chromosome: 1 blastn 1674 67.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
19304581 19304581 PRJNA1061474_P_NODE_48576_length_249_cov_0.875000_g48330_i0 PRJNA1061474 48576 249 0.875 2.17875 Ereboglobus luteus 1796921 Bacteria Bacteria 167 7.709999999999999e-37   NTclustered gi|1387286769|gb|CP023004.1| 1796921 g48330 i0 83.333 1.65863453815261 180 30 72 0 70 249 351077 351256 Ereboglobus luteus strain Ho45, complete genome blastn 413 167 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Ereboglobus Ereboglobus luteus
19304733 19304733 PRJNA1061474_P_NODE_54916_length_243_cov_0.905882_g54670_i0 PRJNA1061474 54916 243 0.905882 2.20129326 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 427 3.11e-115   NTclustered gi|2874253690|emb|OY969416.1| 412056 g54670 i0 98.354 208.008230452675 243 4 100 0 1 243 1315562 1315804 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 blastn 50546 427 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;