contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA1061474" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7389356 | 7389356 | PRJNA1061474_P_NODE_12546_length_586_cov_1.489279_g12309_i0 | PRJNA1061474 | 12546 | 586 | 1.489279 | 8.72717494 | Deinococcus | 1298 | Bacteria | Bacteria | 1009 | 0 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g12309 | i0 | 98.599 | 206.988054607509 | 571 | 6 | 97 | 2 | 17 | 586 | 2148004 | 2148573 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 121295 | 1009 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 9939841 | 9939841 | PRJNA1061474_P_NODE_47628_length_249_cov_0.909091_g47382_i0 | PRJNA1061474 | 47628 | 249 | 0.909091 | 2.26363659 | Deinococcus | 1298 | Bacteria | Bacteria | 324 | 4.33e-84 | NTclustered | gi|1562202923|gb|MK446833.1| | 47478 | g47382 | i0 | 98.895 | 97.0522088353414 | 181 | 2 | 86 | 0 | 34 | 214 | 746 | 566 | Deinococcus sp. strain NW-56 16S ribosomal RNA gene, partial sequence | blastn | 24166 | 327 | 0.990825688073395 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 16314091 | 16314091 | PRJNA1061474_P_NODE_37413_length_294_cov_0.995475_g37167_i0 | PRJNA1061474 | 37413 | 294 | 0.995475 | 2.9266965 | FCB group | 1783270 | Bacteria | Bacteria | 492 | 1.36e-134 | NTclustered | gi|2461130873|gb|OQ647704.1| | 47478 | g37167 | i0 | 96.939 | 102.010204081633 | 294 | 8 | 100 | 1 | 1 | 294 | 558 | 266 | Deinococcus sp. strain BFS3LA3 16S ribosomal RNA gene, partial sequence | blastn | 29991 | 496 | 0.991935483870968 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 23130763 | 23130763 | PRJNA1061474_P_NODE_35019_length_307_cov_2.611111_g34773_i0 | PRJNA1061474 | 35019 | 307 | 2.611111 | 8.01611077 | Deinococcus wulumuqiensis | 980427 | Bacteria | Bacteria | 451 | 2.42e-122 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g34773 | i0 | 98.069 | 256.035830618893 | 259 | 5 | 84 | 0 | 49 | 307 | 1792217 | 1792475 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 78603 | 451 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 23964088 | 23964088 | PRJNA1061474_P_NODE_34259_length_312_cov_1.251046_g34013_i0 | PRJNA1061474 | 34259 | 312 | 1.251046 | 3.90326352 | Deinococcus | 1298 | Bacteria | Bacteria | 267 | 9.57e-67 | NTclustered | gi|470487735|ref|NR_076834.1| | 309887 | g34013 | i0 | 83.849 | 190.416666666667 | 291 | 36 | 93 | 7 | 1 | 291 | 750 | 471 | Deinococcus maricopensis strain LB-34 23S ribosomal RNA gene, complete sequence | blastn | 59410 | 267 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus maricopensis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;