RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1059246" and tax_phylum = "Zoopagomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1059246 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
177037 177037 PRJNA1059246_P_NODE_35761_length_360_cov_1.655052_g35135_i0 PRJNA1059246 35761 360 1.655052 5.9581872 Linderina pennispora 61395 Fungi Fungi 250 1.13e-61   NTclustered gi|2028323432|ref|XM_040888084.1| 61395 g35135 i0 85.95 64.5527777777778 242 24 66 7 1 237 797 561 Linderina pennispora 40S ribosomal protein S5 (DL89DRAFT_268926), mRNA blastn 23239 250 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
3562080 3562080 PRJNA1059246_P_NODE_18023_length_541_cov_3.854701_g17411_i0 PRJNA1059246 18023 541 3.854701 20.85393241 Fungi 4751 Fungi Fungi 217 1.78e-51   NTclustered gi|2324021736|ref|XM_051538475.1| 61397 g17411 i0 80.919 41.6672828096118 283 46 52 7 76 354 73 351 Kickxella alabastrina histone-fold-containing protein (BX661DRAFT_201168), partial mRNA blastn 22542 217 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
9104748 9104748 PRJNA1059246_P_NODE_45188_length_311_cov_1.294118_g44562_i0 PRJNA1059246 45188 311 1.294118 4.02470698 Kickxella alabastrina 61397 Fungi Fungi 115 3.65e-21   NTclustered gi|2324013117|ref|XM_051535774.1| 61397 g44562 i0 85.981 2.01286173633441 107 15 34 0 3 109 1263 1369 Kickxella alabastrina 26S protease regulatory subunit 6B (BX661DRAFT_181682), mRNA blastn 626 115 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
21853831 21853831 PRJNA1059246_P_NODE_318_length_3268_cov_3.710798_g281_i0 PRJNA1059246 318 3268 3.710798 121.26887864 Linderina pennispora 61395 Fungi Fungi 62.1 5.65e-4   NTclustered gi|2028324290|ref|XM_040891683.1| 61395 g281 i0 93.023 0.0413096695226438 43 2 1 1 2223 2264 2294 2252 Linderina pennispora uncharacterized protein (DL89DRAFT_45137), mRNA blastn 135 62.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;