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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA1059246" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA1059246 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1452036 1452036 PRJNA1059246_P_NODE_64422_length_249_cov_0.875000_g63796_i0 PRJNA1059246 64422 249 0.875 2.17875 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 119 2.19e-22   NTclustered gi|695376179|ref|XM_009517427.1| 67593 g63796 i0 80.625 1.26506024096386 160 25 63 6 93 249 120 276 Phytophthora sojae hypothetical protein mRNA blastn 315 119 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
5279514 5279514 PRJNA1059246_P_NODE_15765_length_587_cov_3.000000_g15164_i0 PRJNA1059246 15765 587 3 17.61 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 532 1.6999999999999996e-146   NTclustered gi|695468664|ref|XM_009541629.1| 67593 g15164 i0 88.17 80.8296422487223 448 51 76 2 31 477 112 558 Phytophthora sojae hypothetical protein mRNA blastn 47447 532 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
6114647 6114647 PRJNA1059246_P_NODE_44125_length_316_cov_1.267490_g43499_i0 PRJNA1059246 44125 316 1.26749 4.0052684 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 152 2.84e-32   NTclustered gi|2795020654|ref|XM_067935541.1| 4785 g43499 i0 89.256 26.1867088607595 121 13 38 0 94 214 24 144 Phytophthora cinnamomi Heat shock protein 90-2 (IUM83_11008), partial mRNA blastn 8275 152 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
6555065 6555065 PRJNA1059246_P_NODE_44826_length_313_cov_0.970833_g44200_i0 PRJNA1059246 44826 313 0.970833 3.03870729 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 302 2.63e-77   NTclustered gi|695372616|ref|XM_009516562.1| 67593 g44200 i0 84.566 95.4504792332268 311 40 98 8 3 309 497 191 Phytophthora sojae hypothetical protein partial mRNA blastn 29876 302 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
9939666 9939666 PRJNA1059246_P_NODE_59648_length_257_cov_2.505435_g59022_i0 PRJNA1059246 59648 257 2.505435 6.43896795 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 195 3.67e-45   NTclustered gi|2795020885|ref|XM_067935683.1| 4785 g59022 i0 84.343 25.6536964980545 198 31 77 0 60 257 136 333 Phytophthora cinnamomi ubiquitin-conjugating enzyme E2 N (IUM83_11140), partial mRNA blastn 6593 195 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
10380276 10380276 PRJNA1059246_P_NODE_3109_length_1407_cov_1.779610_g2819_i0 PRJNA1059246 3109 1407 1.77961 25.0391127 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 62.1 2.4e-4   NTclustered gi|2795025219|ref|XM_067925445.1| 4785 g2819 i0 91.111 0.800995024875622 45 4 3 0 601 645 507 463 Phytophthora cinnamomi FUN14 domain-containing protein 1 (IUM83_01579), partial mRNA blastn 1127 62.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
11214873 11214873 PRJNA1059246_P_NODE_32469_length_381_cov_1.818182_g31843_i0 PRJNA1059246 32469 381 1.818182 6.92727342 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 337 8.96e-88   NTclustered gi|2795040529|ref|XM_067944818.1| 4785 g31843 i0 82.888 78.0183727034121 374 64 98 0 1 374 383 10 Phytophthora cinnamomi 60S ribosomal protein L23 (IUM83_19754), partial mRNA blastn 29725 337 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
12930525 12930525 PRJNA1059246_P_NODE_19091_length_524_cov_1.447894_g18473_i0 PRJNA1059246 19091 524 1.447894 7.58696456 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 316 1.65e-81   NTclustered gi|695445584|ref|XM_009535971.1| 67593 g18473 i0 82.466 67.6965648854962 365 61 70 2 160 524 537 176 Phytophthora sojae GTP-binding protein mRNA blastn 35473 316 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
15480069 15480069 PRJNA1059246_P_NODE_54133_length_276_cov_1.896552_g53507_i0 PRJNA1059246 54133 276 1.896552 5.23448352 Phytopythium vexans 907947 SAR_Eukaryotes SAR_Eukaryotes 189 1.8499999999999993e-43   NTclustered gi|442591505|gb|JX115031.1| 907947 g53507 i0 82.71 3.77536231884058 214 35 77 2 63 275 275 63 Phytopythium vexans voucher CBS:119.80 PF16 gene, partial cds blastn 1042 189 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Phytopythium Phytopythium vexans
15480219 15480219 PRJNA1059246_P_NODE_66573_length_247_cov_0.885057_g65947_i0 PRJNA1059246 66573 247 0.885057 2.18609079 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 193 1.26e-44   NTclustered gi|2795057711|ref|XM_067936000.1| 4785 g65947 i0 82.667 57.1012145748988 225 31 89 8 1 221 1450 1670 Phytophthora cinnamomi Long-chain-fatty-acid-CoA ligase (IUM83_11442), partial mRNA blastn 14104 193 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
17589287 17589287 PRJNA1059246_P_NODE_45254_length_311_cov_1.063025_g44628_i0 PRJNA1059246 45254 311 1.063025 3.30600775 root 1 Root_unresolved Root_unresolved 52.8 0.029   NTclustered gi|695377294|ref|XM_009517683.1| 67593 g44628 i0 100 0.180064308681672 28 0 9 0 186 213 3167 3194 Phytophthora sojae hypothetical protein partial mRNA blastn 56 52.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
19302736 19302736 PRJNA1059246_P_NODE_34836_length_366_cov_1.382253_g34210_i0 PRJNA1059246 34836 366 1.382253 5.05904598 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.035   NTclustered gi|2795059019|ref|XM_067941739.1| 4785 g34210 i0 100 0.0765027322404372 28 0 8 0 339 366 584 611 Phytophthora cinnamomi kinetochore protein nuf2 (IUM83_16827), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
20578376 20578376 PRJNA1059246_P_NODE_59657_length_257_cov_2.092391_g59031_i0 PRJNA1059246 59657 257 2.092391 5.37744487 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 254 5.970000000000001e-63   NTclustered gi|2794923360|ref|XM_067881981.1| 164328 g59031 i0 84.436 28.7665369649805 257 40 100 0 1 257 417 161 Phytophthora ramorum Calmodulin (KRP23_11430), partial mRNA blastn 7393 254 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
21853556 21853556 PRJNA1059246_P_NODE_10398_length_746_cov_1.939079_g9850_i0 PRJNA1059246 10398 746 1.939079 14.46552934 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 377 1.0899999999999998e-99   NTclustered gi|813183247|ref|XM_012350822.1| 695850 g9850 i0 81.328 39.0080428954424 482 74 64 14 180 653 544 71 Saprolegnia parasitica CBS 223.65 Ras-like GTP-binding protein YPT1 mRNA blastn 29100 377 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
23129161 23129161 PRJNA1059246_P_NODE_22339_length_477_cov_18.037129_g21718_i0 PRJNA1059246 22339 477 18.037129 86.03710533 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 296 1.94e-75   NTclustered gi|2795040529|ref|XM_067944818.1| 4785 g21718 i0 80.679 34.1509433962264 383 72 80 2 29 410 24 405 Phytophthora cinnamomi 60S ribosomal protein L23 (IUM83_19754), partial mRNA blastn 16290 296 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
23129312 23129312 PRJNA1059246_P_NODE_33319_length_376_cov_1.227723_g32693_i0 PRJNA1059246 33319 376 1.227723 4.61623848 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.036   NTclustered gi|813119750|ref|XM_012340972.1| 695850 g32693 i0 100 0.074468085106383 28 0 7 0 1 28 2794 2767 Saprolegnia parasitica CBS 223.65 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
23129331 23129331 PRJNA1059246_P_NODE_34519_length_368_cov_1.328814_g33893_i0 PRJNA1059246 34519 368 1.328814 4.89003552 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 217 1.17e-51   NTclustered gi|695371798|ref|XM_009516356.1| 67593 g33893 i0 88.333 9.51630434782609 180 21 49 0 2 181 168 347 Phytophthora sojae hypothetical protein mRNA blastn 3502 217 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;