contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA1059246" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 177521 | 177521 | PRJNA1059246_P_NODE_71501_length_242_cov_0.911243_g70875_i0 | PRJNA1059246 | 71501 | 242 | 0.911243 | 2.20520806 | Cystobacter fuscus | 43 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2579665545|gb|CP043492.1| | 43 | g70875 | i0 | 100 | 0.231404958677686 | 28 | 0 | 12 | 0 | 205 | 232 | 6013165 | 6013138 | Cystobacter fuscus strain Cbf 8 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus | ||
| 1451622 | 1451622 | PRJNA1059246_P_NODE_33022_length_378_cov_1.009836_g32396_i0 | PRJNA1059246 | 33022 | 378 | 1.009836 | 3.81718008 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 56.5 | 0.003 | NTclustered | gi|1338588479|gb|CP012673.1| | 56 | g32396 | i0 | 96.97 | 0.0873015873015873 | 33 | 1 | 9 | 0 | 277 | 309 | 3245802 | 3245834 | Sorangium cellulosum strain So ce26 chromosome, complete genome | blastn | 33 | 56.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 1451645 | 1451645 | PRJNA1059246_P_NODE_34922_length_365_cov_2.407534_g34296_i0 | PRJNA1059246 | 34922 | 365 | 2.407534 | 8.7874991 | Corallococcus coralloides | 184914 | Bacteria | Bacteria | 278 | 5.2500000000000006e-70 | NTclustered | gi|380727201|gb|CP003389.1| | 1144275 | g34296 | i0 | 80.833 | 140.049315068493 | 360 | 63 | 99 | 5 | 8 | 364 | 3747362 | 3747006 | Corallococcus coralloides DSM 2259, complete genome | blastn | 51118 | 278 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus coralloides | ||
| 2286767 | 2286767 | PRJNA1059246_P_NODE_51282_length_285_cov_1.452830_g50656_i0 | PRJNA1059246 | 51282 | 285 | 1.45283 | 4.1405655 | Bacteria | 2 | Bacteria | Bacteria | 52.8 | 0.026 | NTclustered | gi|1566495190|gb|CP012670.1| | 56 | g50656 | i0 | 100 | 0.196491228070175 | 28 | 0 | 10 | 0 | 155 | 182 | 7661010 | 7660983 | Sorangium cellulosum strain So ceGT47 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 2727335 | 2727335 | PRJNA1059246_P_NODE_2063_length_1707_cov_14.922889_g1126_i1 | PRJNA1059246 | 2063 | 1707 | 14.922889 | 254.73371523 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 2499 | 0 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g1126 | i1 | 93.112 | 141.260105448155 | 1713 | 107 | 100 | 8 | 1 | 1707 | 7088986 | 7090693 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 241131 | 2499 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 2727696 | 2727696 | PRJNA1059246_P_NODE_48603_length_295_cov_1.270270_g47977_i0 | PRJNA1059246 | 48603 | 295 | 1.27027 | 3.7472965 | Anaeromyxobacter sp. Fw109-5 | 404589 | Bacteria | Bacteria | 407 | 5.069999999999999e-109 | NTclustered | gi|470482295|ref|NR_076524.1| | 404589 | g47977 | i0 | 91.525 | 131.362711864407 | 295 | 25 | 100 | 0 | 1 | 295 | 320 | 26 | Anaeromyxobacter sp. Fw109-5 strain Fw109-5 23S ribosomal RNA, complete sequence | blastn | 38752 | 407 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter sp. Fw109-5 | ||
| 3562256 | 3562256 | PRJNA1059246_P_NODE_68163_length_245_cov_0.895349_g67537_i0 | PRJNA1059246 | 68163 | 245 | 0.895349 | 2.19360505 | Myxococcales | 29 | Bacteria | Bacteria | 344 | 3.26e-90 | NTclustered | gi|545790941|gb|KF270704.1| | 35 | g67537 | i0 | 91.968 | 239.90612244898 | 249 | 14 | 100 | 6 | 1 | 245 | 544 | 298 | Corallococcus macrosporus strain Ccm7 23S ribosomal RNA gene, partial sequence | blastn | 58777 | 344 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus macrosporus | ||
| 4839455 | 4839455 | PRJNA1059246_P_NODE_29244_length_407_cov_1.152695_g28619_i0 | PRJNA1059246 | 29244 | 407 | 1.152695 | 4.69146865 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 226 | 2.1699999999999998e-54 | NTclustered | gi|2869653495|gb|CP175551.1| | 33 | g28619 | i0 | 80.128 | 66.6093366093366 | 312 | 54 | 76 | 8 | 23 | 330 | 2574232 | 2573925 | Myxococcus fulvus strain KYC1117 chromosome, complete genome | blastn | 27110 | 228 | 0.991228070175439 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus fulvus | ||
| 4839604 | 4839604 | PRJNA1059246_P_NODE_69724_length_244_cov_0.900585_g69098_i0 | PRJNA1059246 | 69724 | 244 | 0.900585 | 2.1974274 | root | 1 | Root_unresolved | Root_unresolved | 52.8 | 0.022 | NTclustered | gi|1338588479|gb|CP012673.1| | 56 | g69098 | i0 | 100 | 0.573770491803279 | 28 | 0 | 11 | 0 | 1 | 28 | 2594736 | 2594709 | Sorangium cellulosum strain So ce26 chromosome, complete genome | blastn | 140 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 5279470 | 5279470 | PRJNA1059246_P_NODE_1285_length_2057_cov_9.730343_g608_i3 | PRJNA1059246 | 1285 | 2057 | 9.730343 | 200.15315551 | Anaeromyxobacter paludicola | 2918171 | Bacteria | Bacteria | 60.2 | 0.001 | NTclustered | gi|2199271117|dbj|AP025592.1| | 2918171 | g608 | i3 | 100 | 0.0155566358774915 | 32 | 0 | 2 | 0 | 722 | 753 | 1304905 | 1304936 | Anaeromyxobacter paludicola DNA, complete genome | blastn | 32 | 60.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter paludicola | ||
| 6554919 | 6554919 | PRJNA1059246_P_NODE_32646_length_380_cov_1.589577_g32020_i0 | PRJNA1059246 | 32646 | 380 | 1.589577 | 6.0403926 | Anaeromyxobacter paludicola | 2918171 | Bacteria | Bacteria | 531 | 3.82e-146 | NTclustered | gi|2199271117|dbj|AP025592.1| | 2918171 | g32020 | i0 | 91.864 | 160.257894736842 | 381 | 29 | 100 | 2 | 1 | 380 | 1383512 | 1383133 | Anaeromyxobacter paludicola DNA, complete genome | blastn | 60898 | 531 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter paludicola | ||
| 9104429 | 9104429 | PRJNA1059246_P_NODE_19988_length_509_cov_2.100917_g19370_i0 | PRJNA1059246 | 19988 | 509 | 2.100917 | 10.69366753 | Pyxidicoccus parkwayensis | 2813578 | Bacteria | Bacteria | 52.8 | 0.05 | NTclustered | gi|1998505907|gb|CP071090.1| | 2813578 | g19370 | i0 | 90.244 | 0.0805500982318271 | 41 | 2 | 8 | 1 | 68 | 108 | 6674289 | 6674251 | Pyxidicoccus parkwaysis strain SCPEA02 chromosome | blastn | 41 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pyxidicoccus | Pyxidicoccus parkwayensis | ||
| 19302592 | 19302592 | PRJNA1059246_P_NODE_2336_length_1610_cov_2.382563_g2106_i0 | PRJNA1059246 | 2336 | 1610 | 2.382563 | 38.3592643 | Cystobacter fuscus | 43 | Bacteria | Bacteria | 58.4 | 0.004 | NTclustered | gi|2579656172|gb|CP043491.1| | 43 | g2106 | i0 | 92.683 | 0.0254658385093168 | 41 | 1 | 2 | 2 | 1064 | 1103 | 11058330 | 11058369 | Cystobacter fuscus strain Cbf 10 chromosome, complete genome | blastn | 41 | 58.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;