RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1059246" and tax_phylum = "Commensaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Commensaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1059246 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1451323 1451323 PRJNA1059246_P_NODE_10902_length_727_cov_3.359327_g10346_i0 PRJNA1059246 10902 727 3.359327 24.42230729 Torque teno midi virus 432261 Viruses Viruses 60.2 4.35e-4   NTclustered gi|2169230874|gb|MN779842.1| 432261 g10346 i0 94.737 0.225584594222834 38 2 5 0 579 616 2313 2276 MAG: Torque teno midi virus isolate SAfiA-457-9 ORF1 gene, complete cds blastn 164 60.2 1 Viruses   Shotokuvirae Commensaviricota Cardeaviricetes Sanitavirales Anelloviridae   Torque teno midi virus
14205541 14205541 PRJNA1059246_P_NODE_23092_length_468_cov_1.718987_g22469_i0 PRJNA1059246 23092 468 1.718987 8.04485916 Torque teno midi virus 432261 Viruses Viruses 52.8 0.045   NTclustered gi|2168962200|gb|MN778178.1| 432261 g22469 i0 100 0.0598290598290598 28 0 6 0 21 48 2241 2214 MAG: Torque teno midi virus isolate SAfiA-272-32 ORF1 gene, complete cds blastn 28 52.8 1 Viruses   Shotokuvirae Commensaviricota Cardeaviricetes Sanitavirales Anelloviridae   Torque teno midi virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;