RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA1059246" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 9 ✖

bioproject 1

  • PRJNA1059246 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2727232 2727232 PRJNA1059246_P_NODE_13163_length_651_cov_2.776817_g12579_i0 PRJNA1059246 13163 651 2.776817 18.07707867 Thecamonas trahens 529818 Root_unresolved Root_unresolved 494 8.95e-135   NTclustered gi|923129792|ref|XM_013902908.1| 461836 g12579 i0 83.549 54.7450076804916 541 76 82 9 116 650 545 12 Thecamonas trahens ATCC 50062 Ras-like C3 botulinum toxin substrate 1 (AMSG_04690), mRNA blastn 35639 494 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
2727406 2727406 PRJNA1059246_P_NODE_25203_length_445_cov_1.448925_g24578_i0 PRJNA1059246 25203 445 1.448925 6.44771625 Thecamonas trahens 529818 Root_unresolved Root_unresolved 294 6.48e-75   NTclustered gi|923132712|ref|XM_013904368.1| 461836 g24578 i0 80 14.6988764044944 405 75 90 6 42 443 1095 694 Thecamonas trahens ATCC 50062 actin-like protein 3 (AMSG_03466), partial mRNA blastn 6541 294 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
5279796 5279796 PRJNA1059246_P_NODE_36705_length_355_cov_1.088652_g36079_i0 PRJNA1059246 36705 355 1.088652 3.8647146 Thecamonas trahens 529818 Root_unresolved Root_unresolved 213 1.46e-50   NTclustered gi|923138884|ref|XM_013907453.1| 461836 g36079 i0 77.841 0.991549295774648 352 72 98 6 7 355 1196 848 Thecamonas trahens ATCC 50062 elongation factor 2 (AMSG_00036), mRNA blastn 352 213 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
8664591 8664591 PRJNA1059246_P_NODE_25987_length_436_cov_2.845730_g25362_i0 PRJNA1059246 25987 436 2.84573 12.4073828 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 233 1.3999999999999997e-56   NTclustered gi|116222168|gb|DQ980460.1| 41120 g25362 i0 81.145 53.447247706422 297 50 67 6 143 436 1906 1613 Apusomonas proboscidea clone aphsp90 Hsp90 mRNA, partial cds blastn 23303 233 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Apusomonas Apusomonas proboscidea
12930441 12930441 PRJNA1059246_P_NODE_12351_length_676_cov_2.288557_g11772_i0 PRJNA1059246 12351 676 2.288557 15.47064532 Thecamonas trahens 529818 Root_unresolved Root_unresolved 63.9 3.11e-5   NTclustered gi|923129264|ref|XM_013902644.1| 461836 g11772 i0 100 0.276627218934911 34 0 5 0 321 354 196 163 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_05025), partial mRNA blastn 187 63.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
12930599 12930599 PRJNA1059246_P_NODE_24231_length_455_cov_2.209424_g23607_i0 PRJNA1059246 24231 455 2.209424 10.0528792 Thecamonas trahens 529818 Root_unresolved Root_unresolved 255 3.13e-63   NTclustered gi|923121052|ref|XM_013898544.1| 461836 g23607 i0 80.392 8.77802197802198 357 53 76 11 1 348 859 1207 Thecamonas trahens ATCC 50062 DEAD-box ATP-dependent RNA helicase 56 (AMSG_09968), mRNA blastn 3994 255 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
12930815 12930815 PRJNA1059246_P_NODE_43991_length_317_cov_0.946721_g43365_i0 PRJNA1059246 43991 317 0.946721 3.00110557 Thecamonas trahens 529818 Root_unresolved Root_unresolved 315 3.4299999999999993e-81   NTclustered gi|923133342|ref|XM_013904683.1| 461836 g43365 i0 84.543 3.75709779179811 317 49 100 0 1 317 1017 701 Thecamonas trahens ATCC 50062 beta-ureidopropionase (AMSG_03295), partial mRNA blastn 1191 315 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
12930934 12930934 PRJNA1059246_P_NODE_53151_length_279_cov_1.932039_g52525_i0 PRJNA1059246 53151 279 1.932039 5.39038881 Thecamonas trahens 529818 Root_unresolved Root_unresolved 324 4.93e-84   NTclustered gi|923129538|ref|XM_013902781.1| 461836 g52525 i0 87.814 96.8637992831541 279 31 100 2 1 279 2906 2631 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_11856), partial mRNA blastn 27025 324 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16754316 16754316 PRJNA1059246_P_NODE_63374_length_249_cov_2.625000_g62748_i0 PRJNA1059246 63374 249 2.625 6.53625 Thecamonas trahens 529818 Root_unresolved Root_unresolved 62.1 3.74e-5   NTclustered gi|923122824|ref|XM_013899428.1| 461836 g62748 i0 82.667 0.698795180722892 75 7 30 4 5 79 3204 3136 Thecamonas trahens ATCC 50062 CMGC/DYRK/YAK protein kinase (AMSG_09172), mRNA blastn 174 62.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;