contig_metadata
7 rows where analysis = "blastn", bioproject = "PRJNA1057075" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4839334 | 4839334 | PRJNA1057075_S_NODE_2464_length_265_cov_52881.166667_g2365_i0 | PRJNA1057075 | 2464 | 265 | 52881.166667 | 140135.09166755 | Bacteria | 2 | Bacteria | Bacteria | 398 | 2.7e-106 | NTclustered | gi|1042399388|gb|KU555885.1| | 1292 | g2365 | i0 | 98.238 | 431.267924528302 | 227 | 4 | 86 | 0 | 1 | 227 | 443 | 669 | Staphylococcus warneri strain SWA15219-3 16S-23S ribosomal RNA intergenic spacer gene, region | blastn | 114286 | 398 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 6554550 | 6554550 | PRJNA1057075_S_NODE_9986_length_157_cov_2.185185_g9887_i0 | PRJNA1057075 | 9986 | 157 | 2.185185 | 3.43074045 | Emergencia timonensis | 1776384 | Bacteria | Bacteria | 52.8 | 0.013 | NTclustered | gi|2613044976|gb|CP136188.1| | 1776384 | g9887 | i0 | 100 | 0.713375796178344 | 28 | 0 | 18 | 0 | 75 | 102 | 1824571 | 1824544 | Emergencia timonensis strain NTUH-41-K21 chromosome, complete genome | blastn | 112 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Anaerovoracaceae | Emergencia | Emergencia timonensis | ||
| 7829201 | 7829201 | PRJNA1057075_S_NODE_4947_length_204_cov_0.948387_g4848_i0 | PRJNA1057075 | 4947 | 204 | 0.948387 | 1.93470948 | Clostridium septicum | 1504 | Bacteria | Bacteria | 220 | 4.61e-53 | NTclustered | gi|2260370548|gb|CP099799.1| | 1504 | g4848 | i0 | 89.326 | 744.647058823529 | 178 | 15 | 86 | 3 | 25 | 200 | 231885 | 231710 | Clostridium septicum strain RMA 8861 chromosome, complete genome | blastn | 151908 | 220 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium septicum | ||
| 13764679 | 13764679 | PRJNA1057075_S_NODE_7091_length_177_cov_1.593750_g6992_i0 | PRJNA1057075 | 7091 | 177 | 1.59375 | 2.8209375 | Lactobacillus | 1578 | Bacteria | Bacteria | 324 | 2.87e-84 | NTclustered | gi|2913177562|gb|CP180627.1| | 47770 | g6992 | i0 | 100 | 377.35593220339 | 175 | 0 | 99 | 0 | 1 | 175 | 1145979 | 1146153 | Lactobacillus crispatus strain T31e chromosome, complete genome | blastn | 66792 | 324 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus crispatus | ||
| 19302304 | 19302304 | PRJNA1057075_S_NODE_2376_length_268_cov_52638.155251_g2277_i0 | PRJNA1057075 | 2376 | 268 | 52638.155251 | 141070.25607268 | Staphylococcus hominis | 1290 | Bacteria | Bacteria | 412 | 9.77e-111 | NTclustered | gi|1780389983|gb|CP046301.1| | 1290 | g2277 | i0 | 99.558 | 410.981343283582 | 226 | 1 | 84 | 0 | 43 | 268 | 1064642 | 1064867 | Staphylococcus hominis strain FDAARGOS_747 chromosome, complete genome | blastn | 110143 | 412 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 21853470 | 21853470 | PRJNA1057075_S_NODE_7058_length_177_cov_2.875000_g6959_i0 | PRJNA1057075 | 7058 | 177 | 2.875 | 5.08875 | Clostridium perfringens | 1502 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|2702800439|gb|CP148701.1| | 1502 | g6959 | i0 | 100 | 0.169491525423729 | 30 | 0 | 17 | 0 | 119 | 148 | 502640 | 502669 | Clostridium perfringens strain Z1322PCP0092 chromosome, complete genome | blastn | 30 | 56.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium perfringens | ||
| 23128899 | 23128899 | PRJNA1057075_S_NODE_4179_length_219_cov_4.282353_g4080_i0 | PRJNA1057075 | 4179 | 219 | 4.282353 | 9.37835307 | Weissella paramesenteroides | 1249 | Bacteria | Bacteria | 374 | 3.64e-99 | NTclustered | gi|1937010051|gb|CP065046.1| | 1249 | g4080 | i0 | 98.131 | 547.922374429224 | 214 | 4 | 98 | 0 | 1 | 214 | 363558 | 363345 | Weissella paramesenteroides strain STCH-BD1 chromosome | blastn | 119995 | 374 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Weissella paramesenteroides |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;