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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA1050291" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 11 ✖

bioproject 1

  • PRJNA1050291 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3561809 3561809 PRJNA1050291_P_NODE_4543_length_765_cov_3.319364_g3658_i0 PRJNA1050291 4543 765 3.319364 25.3931346 Alphapolyomavirus 1891713 Viruses Viruses 1413 0   NTclustered gi|410060813|gb|JX045708.1| 493803 g3658 i0 100 87.7385620915033 765 0 100 0 1 765 47 811 Merkel cell polyomavirus isolate MKL-2, partial genome blastn 67120 1413 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Alphapolyomavirus Alphapolyomavirus quintihominis
4002349 4002349 PRJNA1050291_P_NODE_13964_length_299_cov_2.579646_g13073_i0 PRJNA1050291 13964 299 2.579646 7.71314154 Caudoviricetes sp. 2832643 Viruses Viruses 67.6 9.93e-7   NTclustered gi|2052970105|tpg|BK030396.1| 2832643 g13073 i0 95.238 1.70234113712375 42 2 14 0 203 244 6124 6165 MAG TPA_asm: Caudoviricetes sp. isolate ctf9z6, partial genome blastn 509 67.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
11654511 11654511 PRJNA1050291_P_NODE_17250_length_261_cov_1.510638_g16359_i0 PRJNA1050291 17250 261 1.510638 3.94276518 Caudoviricetes sp. 2832643 Viruses Viruses 422 1.57e-113   NTclustered gi|2059699024|tpg|BK029571.1| 2832643 g16359 i0 95.785 2 261 11 100 0 1 261 15147 15407 MAG TPA_asm: Caudoviricetes sp. isolate ctTKM2, partial genome blastn 522 422 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
11654836 11654836 PRJNA1050291_P_NODE_9790_length_393_cov_0.878125_g8899_i0 PRJNA1050291 9790 393 0.878125 3.45103125 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.038   NTclustered gi|2057979499|tpg|BK046725.1| 2832643 g8899 i0 100 0.142493638676845 28 0 7 0 266 293 2495 2522 MAG TPA_asm: Caudoviricetes sp. isolate ctn3E11, partial genome blastn 56 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
12490015 12490015 PRJNA1050291_P_NODE_8990_length_420_cov_2.968300_g8099_i0 PRJNA1050291 8990 420 2.9683 12.46686 Alphapolyomavirus 1891713 Viruses Viruses 776 0   NTclustered gi|207705693|gb|FJ173808.1| 493803 g8099 i0 100 100 420 0 100 0 1 420 1227 808 Merkel cell polyomavirus isolate 345 truncated large T antigen gene, partial cds; and small T antigen gene, complete cds blastn 42000 776 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Alphapolyomavirus Alphapolyomavirus quintihominis
12929718 12929718 PRJNA1050291_P_NODE_19171_length_249_cov_0.886364_g18280_i0 PRJNA1050291 19171 249 0.886364 2.20704636 Caudoviricetes sp. 2832643 Viruses Viruses 455 1.47e-123   NTclustered gi|2059768953|tpg|BK039098.1| 2832643 g18280 i0 99.598 10.9156626506024 249 1 100 0 1 249 10194 9946 MAG TPA_asm: Caudoviricetes sp. isolate ctLx11, partial genome blastn 2718 455 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
16752734 16752734 PRJNA1050291_P_NODE_10454_length_373_cov_1.443333_g9563_i0 PRJNA1050291 10454 373 1.443333 5.38363209 Betapapillomavirus 2 333924 Viruses Viruses 603 7.809999999999998e-168   NTclustered gi|290964861|emb|FN677756.1| 743812 g9563 i0 99.399 15.9356568364611 333 1 89 1 1 333 5585 5916 Human papillomavirus type 151, complete genome, isolate SIBX2 blastn 5944 603 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 2
16752941 16752941 PRJNA1050291_P_NODE_20014_length_246_cov_0.901734_g19123_i0 PRJNA1050291 20014 246 0.901734 2.21826564 Caudoviricetes sp. 2832643 Viruses Viruses 455 1.4500000000000002e-123   NTclustered gi|2054553869|tpg|BK048103.1| 2832643 g19123 i0 100 18.979674796748 246 0 100 0 1 246 8809 8564 MAG TPA_asm: Caudoviricetes sp. isolate ctpAF5, partial genome blastn 4669 455 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
19301550 19301550 PRJNA1050291_P_NODE_10536_length_369_cov_715.912162_g9645_i0 PRJNA1050291 10536 369 715.912162 2641.71587778 Betacoronavirus pandemicum 3418604 Viruses Viruses 78.7 5.78e-10   NTclustered gi|2155043487|emb|OV016108.1| 2697049 g9645 i0 92.727 12.3089430894309 55 2 15 2 257 310 30319 30266 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4542 78.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
20137553 20137553 PRJNA1050291_P_NODE_9436_length_404_cov_1.990937_g8545_i0 PRJNA1050291 9436 404 1.990937 8.04338548 Alphapolyomavirus 1891713 Viruses Viruses 734 0   NTclustered gi|410060816|gb|JX045709.1| 493803 g8545 i0 99.504 91.6460396039604 403 2 99 0 1 403 5259 4857 Merkel cell polyomavirus isolate MS-1, partial genome blastn 37025 734 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Alphapolyomavirus Alphapolyomavirus quintihominis
20577041 20577041 PRJNA1050291_P_NODE_19277_length_249_cov_0.863636_g18386_i0 PRJNA1050291 19277 249 0.863636 2.15045364 Caudoviricetes sp. 2832643 Viruses Viruses 455 1.47e-123   NTclustered gi|2056986524|tpg|BK023434.1| 2832643 g18386 i0 99.598 3.93172690763052 249 1 100 0 1 249 29862 29614 MAG TPA_asm: Caudoviricetes sp. isolate ctuDX1, partial genome blastn 979 455 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;