RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1047749" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1047749 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2725334 2725334 PRJNA1047749_P_NODE_15103_length_317_cov_2.750000_g14838_i0 PRJNA1047749 15103 317 2.75 8.7175 Pseudoloma neurophilia 146866 Fungi Fungi 274 5.819999999999998e-69   NTclustered gi|11993647|gb|AF322654.1| 146866 g14838 i0 98.701 66.1230283911672 154 2 96 0 162 315 417 264 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20961 274 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
4001598 4001598 PRJNA1047749_P_NODE_31504_length_281_cov_2.985577_g31237_i0 PRJNA1047749 31504 281 2.985577 8.38947137 Pseudoloma neurophilia 146866 Fungi Fungi 475 1.2999999999999999e-129   NTclustered gi|11993647|gb|AF322654.1| 146866 g31237 i0 98.872 79.6192170818505 266 2 94 1 1 265 266 1 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22373 475 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
10378401 10378401 PRJNA1047749_P_NODE_32169_length_278_cov_3.731707_g31902_i0 PRJNA1047749 32169 278 3.731707 10.37414546 Heterosporis anguillarum 184033 Fungi Fungi 322 1.77e-83   NTclustered gi|27448231|gb|AF387331.1| 184033 g31902 i0 88.519 50.1330935251799 270 26 96 4 1 267 2100 1833 Heterosporis anguillarum small subunit ribosomal RNA gene, internal transcribed spacer, and large subunit ribosomal RNA gene, complete sequence blastn 13937 322 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis anguillarum
20575995 20575995 PRJNA1047749_P_NODE_20197_length_312_cov_2.799163_g19930_i0 PRJNA1047749 20197 312 2.799163 8.73338856 Pseudoloma neurophilia 146866 Fungi Fungi 276 1.59e-69   NTclustered gi|11993647|gb|AF322654.1| 146866 g19930 i0 99.338 31.4903846153846 151 1 93 0 162 312 1724 1874 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9825 276 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
22686743 22686743 PRJNA1047749_P_NODE_11258_length_373_cov_2.923333_g10994_i0 PRJNA1047749 11258 373 2.923333 10.90403209 Pleistophoridae 35232 Fungi Fungi 424 6.53e-114   NTclustered gi|134147422|gb|EF119339.1| 249366 g10994 i0 89.275 15.4959785522788 345 28 91 9 19 356 2077 2419 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 5780 425 0.997647058823529 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;