RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA1047551" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1047551 · 1 ✖

analysis 1

  • blastn · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20136251 20136251 PRJNA1047551_S_NODE_4456_length_225_cov_3.052632_g4329_i0 PRJNA1047551 4456 225 3.052632 6.868422 Ploima 84394 Rotifera other_Eukaryota 241 3.9800000000000004e-59   NTclustered gi|1859640894|gb|MN970216.1| 360698 g4329 i0 86.283 7.24444444444444 226 25 98 3 1 221 12308 12532 Proales similis mitochondrion, complete genome blastn 1630 241 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;