RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1047551" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1047551 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6552709 6552709 PRJNA1047551_S_NODE_9666_length_170_cov_1.600000_g9539_i0 PRJNA1047551 9666 170 1.6 2.72 Rhizopus microsporus 58291 Fungi Fungi 185 1.3399999999999996e-42   NTclustered gi|1331196703|ref|XM_023613479.1| 1340429 g9539 i0 86.747 46.2882352941176 166 22 98 0 1 166 332 497 Rhizopus microsporus ATCC 52813 glyceraldehyde-3-phosphate dehydrogenase 3 (RHIMIDRAFT_287486), partial mRNA blastn 7869 185 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
18861439 18861439 PRJNA1047551_S_NODE_2775_length_275_cov_16.266667_g2648_i0 PRJNA1047551 2775 275 16.266667 44.73333425 Fungi 4751 Fungi Fungi 466 7.62e-127   NTclustered gi|658131632|emb|HF968958.1| 4874 g2648 i0 98.851 142.872727272727 261 3 95 0 15 275 1997 2257 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 39290 466 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
23127050 23127050 PRJNA1047551_S_NODE_9899_length_168_cov_2.977444_g9772_i0 PRJNA1047551 9899 168 2.977444 5.00210592 Lichtheimia ornata 688661 Fungi Fungi 93.5 8.32e-15   NTclustered gi|2553577975|ref|XM_058486196.1| 688661 g9772 i0 86.047 1.10119047619048 86 12 51 0 13 98 661 746 Lichtheimia ornata 40S ribosomal protein S2 (O0I10_006164), partial mRNA blastn 185 93.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;