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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1047551" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1047551 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1449307 1449307 PRJNA1047551_S_NODE_3242_length_258_cov_11.681614_g3115_i0 PRJNA1047551 3242 258 11.681614 30.13856412 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 76.8 1.39e-9   NTclustered gi|1752364844|ref|XM_030986854.1| 7668 g3115 i0 97.727 0.523255813953488 44 1 17 0 1 44 1385 1428 PREDICTED: Strongylocentrotus purpuratus tubulin beta chain-like (LOC115924521), mRNA blastn 135 76.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
10377911 10377911 PRJNA1047551_S_NODE_5509_length_209_cov_1.465517_g5382_i0 PRJNA1047551 5509 209 1.465517 3.06293053 Asterias rubens 7604 Echinodermata other_Eukaryota 52.8 0.018   NTclustered gi|1834288538|ref|XM_033784317.1| 7604 g5382 i0 100 0.267942583732057 28 0 13 0 170 197 724 697 PREDICTED: Asterias rubens heterogeneous nuclear ribonucleoprotein A3-like (LOC117300634), transcript variant X2, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
15477433 15477433 PRJNA1047551_S_NODE_6033_length_201_cov_8.421687_g5906_i0 PRJNA1047551 6033 201 8.421687 16.92759087 Asterias rubens 7604 Echinodermata other_Eukaryota 119 1.7000000000000002e-22   NTclustered gi|1834261769|ref|XM_033773906.1| 7604 g5906 i0 83.077 13.9402985074627 130 22 65 0 67 196 358 229 PREDICTED: Asterias rubens 60S ribosomal protein L44-like (LOC117291900), mRNA blastn 2802 119 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
20575542 20575542 PRJNA1047551_S_NODE_10217_length_166_cov_3.427481_g10090_i0 PRJNA1047551 10217 166 3.4274810000000002 5.68961846 Acanthaster planci 133434 Echinodermata other_Eukaryota 111 2.26e-20   NTclustered gi|1229126891|ref|XM_022246344.1| 133434 g10090 i0 88.889 17.9036144578313 90 10 54 0 36 125 483 394 PREDICTED: Acanthaster planci 40S ribosomal protein S14a (LOC110985294), transcript variant X2, mRNA blastn 2972 111 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;