contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA1047551" and tax_clade = "Cyanobacteriota/Melainabacteria group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2285103 | 2285103 | PRJNA1047551_S_NODE_7922_length_182_cov_2.693878_g7795_i0 | PRJNA1047551 | 7922 | 182 | 2.693878 | 4.90285796 | root | 1 | Root_unresolved | Root_unresolved | 315 | 1.79e-81 | NTclustered | gi|326368684|gb|JF273592.1| | 1211 | g7795 | i0 | 99.422 | 101.60989010989 | 173 | 1 | 95 | 0 | 9 | 181 | 721 | 549 | Uncultured cyanobacterium clone LW-b6 16S ribosomal RNA gene, partial sequence | blastn | 18493 | 315 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | uncultured cyanobacterium | |||||
| 4001106 | 4001106 | PRJNA1047551_S_NODE_364_length_687_cov_7.924847_g263_i0 | PRJNA1047551 | 364 | 687 | 7.924847 | 54.44369889 | Nostoc sp. C117 | 3349875 | Bacteria | Bacteria | 1107 | 0 | NTclustered | gi|2831016856|gb|CP170991.1| | 3349875 | g263 | i0 | 95.912 | 316.967976710335 | 685 | 24 | 99 | 4 | 1 | 684 | 147961 | 147280 | Nostoc sp. C117 chromosome, complete genome | blastn | 217757 | 1107 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc sp. C117 | |
| 5277329 | 5277329 | PRJNA1047551_S_NODE_1225_length_401_cov_10.636612_g1098_i0 | PRJNA1047551 | 1225 | 401 | 10.636612 | 42.65281412 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 640 | 6.45e-179 | NTclustered | gi|453199515|gb|JQ997495.1| | 259957 | g1098 | i0 | 96.623 | 140.683291770574 | 385 | 13 | 96 | 0 | 17 | 401 | 3 | 387 | Uncultured Chroococcidiopsis sp. clone GKJWQY101AIMXN 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 56414 | 640 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 9102063 | 9102063 | PRJNA1047551_S_NODE_10228_length_166_cov_2.717557_g10101_i0 | PRJNA1047551 | 10228 | 166 | 2.717557 | 4.51114462 | Aliterella chasmolithica | 2739056 | Bacteria | Bacteria | 246 | 5.94e-61 | NTclustered | gi|1713066352|gb|MN243145.1| | 2599943 | g10101 | i0 | 96.026 | 110.825301204819 | 151 | 6 | 91 | 0 | 2 | 152 | 2129 | 1979 | Aliterella chasmolithica PJ S15 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 18397 | 246 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Aliterellaceae | Aliterella | Aliterella chasmolithica | |
| 15477450 | 15477450 | PRJNA1047551_S_NODE_6753_length_193_cov_2.221519_g6626_i0 | PRJNA1047551 | 6753 | 193 | 2.221519 | 4.28753167 | Oculatella lusitanica | 2928764 | Bacteria | Bacteria | 231 | 1.9900000000000002e-56 | NTclustered | gi|1793889078|gb|MN061918.1| | 2692086 | g6626 | i0 | 92.121 | 142.937823834197 | 165 | 12 | 85 | 1 | 30 | 193 | 3620 | 3456 | Oculatella lusitanica LEGE 161147 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 27587 | 231 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oculatellales | Oculatellaceae | Oculatella | Oculatella lusitanica | |
| 16751520 | 16751520 | PRJNA1047551_S_NODE_314_length_730_cov_12.843165_g221_i0 | PRJNA1047551 | 314 | 730 | 12.843165 | 93.7551045 | Sphaerospermopsis torques-reginae | 984207 | Bacteria | Bacteria | 1074 | 0 | NTclustered | gi|2080647037|gb|CP080598.1| | 984208 | g221 | i0 | 93.846 | 162.131506849315 | 715 | 40 | 98 | 4 | 19 | 730 | 476255 | 475542 | Sphaerospermopsis torques-reginae ITEP-024 chromosome | blastn | 118356 | 1074 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Aphanizomenonaceae | Sphaerospermopsis | Sphaerospermopsis torques-reginae | |
| 20136264 | 20136264 | PRJNA1047551_S_NODE_7536_length_185_cov_6.726667_g7409_i0 | PRJNA1047551 | 7536 | 185 | 6.726667 | 12.44433395 | Cyanophyceae | 3028117 | Bacteria | Bacteria | 302 | 1.42e-77 | NTclustered | gi|2245450207|gb|CP083761.1| | 155894 | g7409 | i0 | 98.256 | 97.6432432432432 | 172 | 3 | 93 | 0 | 1 | 172 | 794460 | 794289 | Chroococcidiopsis sp. CCMEE 29 chromosome | blastn | 18064 | 302 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | Chroococcidiopsis sp. CCMEE 29 | |
| 21411840 | 21411840 | PRJNA1047551_S_NODE_1057_length_431_cov_20.858586_g930_i0 | PRJNA1047551 | 1057 | 431 | 20.858586 | 89.90050566 | Nostocales | 1161 | Bacteria | Bacteria | 715 | 0 | NTclustered | gi|817925425|gb|CP011382.1| | 1337936 | g930 | i0 | 96.752 | 274.665893271462 | 431 | 10 | 99 | 4 | 1 | 429 | 2530634 | 2530206 | Calothrix sp. 336/3, complete genome | blastn | 118381 | 721 | 0.991678224687933 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Calotrichaceae | Calothrix | Calothrix sp. 336/3 | |
| 23126891 | 23126891 | PRJNA1047551_S_NODE_3499_length_249_cov_14.411215_g3372_i0 | PRJNA1047551 | 3499 | 249 | 14.411215 | 35.88392535 | Cyanobacteria bacterium K4m | 2830641 | Bacteria | Bacteria | 383 | 7.04e-102 | NTclustered | gi|2029258269|gb|MZ020199.1| | 2830641 | g3372 | i0 | 97.748 | 174.04016064257 | 222 | 5 | 89 | 0 | 6 | 227 | 1455 | 1234 | Cyanobacteria bacterium K4m 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence | blastn | 43336 | 383 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanobacteria bacterium K4m | |||||
| 23962280 | 23962280 | PRJNA1047551_S_NODE_12079_length_157_cov_1.180328_g11952_i0 | PRJNA1047551 | 12079 | 157 | 1.180328 | 1.85311496 | root | 1 | Root_unresolved | Root_unresolved | 291 | 2.52e-74 | NTclustered | gi|151351748|gb|EF664457.1| | 1211 | g11952 | i0 | 100 | 99.2547770700637 | 157 | 0 | 100 | 0 | 1 | 157 | 522 | 678 | Uncultured cyanobacterium clone GASP-MB1S1_G12 16S ribosomal RNA gene, partial sequence | blastn | 15583 | 291 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | uncultured cyanobacterium | |||||
| 24400733 | 24400733 | PRJNA1047551_S_NODE_6820_length_193_cov_1.050633_g6693_i0 | PRJNA1047551 | 6820 | 193 | 1.050633 | 2.02772169 | Spirirestis rafaelensis | 293980 | Bacteria | Bacteria | 340 | 3.17e-89 | NTclustered | gi|1358126427|gb|KY963625.1| | 119528 | g6693 | i0 | 98.454 | 170.937823834197 | 194 | 2 | 100 | 1 | 1 | 193 | 769 | 576 | Spirirestis rafaelensis SRS70 strain UTEX B 2660 23S ribosomal RNA gene, partial sequence | blastn | 32991 | 340 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Tolypothrichaceae | Spirirestis | Spirirestis rafaelensis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;