RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA1047321" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1047321 · 21 ✖

analysis 1

  • blastn · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1009791 1009791 PRJNA1047321_P_NODE_5121_length_281_cov_12.740385_g4950_i0 PRJNA1047321 5121 281 12.740385 35.80048185 Cryptococcus 5206 Fungi Fungi 307 5.0100000000000005e-79   NTclustered gi|1338633128|gb|CP025718.1| 5207 g4950 i0 87.004 141.565836298932 277 31 98 5 1 276 271466 271194 Cryptococcus neoformans strain EN28 chromosome 2, complete sequence blastn 39780 307 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus neoformans
2285060 2285060 PRJNA1047321_P_NODE_7662_length_246_cov_0.890173_g7491_i0 PRJNA1047321 7662 246 0.890173 2.18982558 Malassezia 55193 Fungi Fungi 455 1.4500000000000002e-123   NTclustered gi|1101565583|gb|KX839604.1| 55194 g7491 i0 100 100 246 0 100 0 1 246 522 277 Malassezia furfur isolate GDMUZJ2015140 26S ribosomal RNA gene, partial sequence blastn 24600 455 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia furfur
2285067 2285067 PRJNA1047321_P_NODE_8922_length_234_cov_2.167702_g8751_i0 PRJNA1047321 8922 234 2.167702 5.07242268 Cryptococcus 5206 Fungi Fungi 252 1.93e-62   NTclustered gi|1338633128|gb|CP025718.1| 5207 g8751 i0 86.066 139.461538461538 244 23 100 8 1 234 271222 271464 Cryptococcus neoformans strain EN28 chromosome 2, complete sequence blastn 32634 252 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus neoformans
2724899 2724899 PRJNA1047321_P_NODE_1983_length_485_cov_0.963592_g1814_i0 PRJNA1047321 1983 485 0.963592 4.6734212 Hannaella oryzae 4979 Fungi Fungi 436 1.12e-117   NTclustered gi|1511245097|ref|NC_039747.1| 4979 g1814 i0 86.029 62.6350515463918 408 56 84 1 1 407 7633 8040 Hannaella oryzae mitochondrion, complete genome blastn 30378 436 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Hannaella Hannaella oryzae
4000904 4000904 PRJNA1047321_P_NODE_4924_length_286_cov_2.408451_g4753_i0 PRJNA1047321 4924 286 2.408451 6.88816986 Flammulina velutipes 38945 Fungi Fungi 462 1.03e-125   NTclustered gi|1487130313|gb|MH468771.1| 38945 g4753 i0 95.804 107.048951048951 286 12 100 0 1 286 5825 5540 Flammulina velutipes strain strain NJ6-3 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, intergenic spacer 1, 5S ribosomal RNA gene, and intergenic spacer 2, complete sequence blastn 30616 462 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Physalacriaceae Flammulina Flammulina velutipes
4837859 4837859 PRJNA1047321_P_NODE_7464_length_246_cov_3.462428_g7293_i0 PRJNA1047321 7464 246 3.462428 8.51757288 Filobasidium 5209 Fungi Fungi 455 1.4500000000000002e-123   NTclustered gi|452084931|emb|HF568992.1| 89934 g7293 i0 100 100.260162601626 246 0 100 0 1 246 289 44 Filobasidium globisporum partial 18S rRNA gene, strain A10 blastn 24664 455 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Filobasidium Filobasidium globisporum
5277250 5277250 PRJNA1047321_P_NODE_7045_length_248_cov_1.428571_g6874_i0 PRJNA1047321 7045 248 1.428571 3.54285608 Malassezia globosa 76773 Fungi Fungi 442 1.1399999999999995e-119   NTclustered gi|915512562|gb|KP825345.1| 76773 g6874 i0 98.79 99.9596774193548 248 3 100 0 1 248 284 37 Malassezia globosa strain ISOSEB15I 28S ribosomal RNA gene, partial sequence blastn 24790 442 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
7387584 7387584 PRJNA1047321_P_NODE_3346_length_357_cov_3.323944_g3176_i0 PRJNA1047321 3346 357 3.323944 11.86648008 Tremellomycetes 155616 Fungi Fungi 654 0   NTclustered gi|406206|dbj|D13460.1|FILSSRD7 5210 g3176 i0 99.72 99.9607843137255 357 1 100 0 1 357 1614 1258 Filobasidium floriforme gene for small subunit ribosomal RNA blastn 35686 654 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Filobasidium Filobasidium floriforme
7827060 7827060 PRJNA1047321_P_NODE_6587_length_251_cov_0.865169_g6416_i0 PRJNA1047321 6587 251 0.865169 2.17157419 Malassezia restricta 76775 Fungi Fungi 448 2.48e-121   NTclustered gi|1546635504|ref|XM_027629411.1| 76775 g6416 i0 98.805 1 251 3 100 0 1 251 582 832 Malassezia restricta YagE family protein (MRET_2784), partial mRNA blastn 251 448 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
8663022 8663022 PRJNA1047321_P_NODE_8927_length_233_cov_4.712500_g8756_i0 PRJNA1047321 8927 233 4.7125 10.980125 Tremellales 5234 Fungi Fungi 431 2.2899999999999996e-116   NTclustered gi|229001878|emb|FN357212.1| 159573 g8756 i0 100 99.9828326180258 233 0 100 0 1 233 247 15 Cryptococcus heimaeyensis partial 26S rRNA gene, isolate AY-73 blastn 23296 431 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Vishniacozyma Vishniacozyma heimaeyensis
11652937 11652937 PRJNA1047321_P_NODE_2850_length_390_cov_2.735016_g2681_i0 PRJNA1047321 2850 390 2.735016 10.6665624 uncultured Filobasidiella 1503101 Fungi Fungi 704 0   NTclustered gi|387156411|emb|HE806144.1| 1503101 g2681 i0 99.231 150.025641025641 390 3 100 0 1 390 1415 1804 Uncultured Filobasidiella partial 26S rRNA gene, clone Ao0Yyyy6 blastn 58510 704 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Tremellaceae   uncultured Filobasidiella
11652997 11652997 PRJNA1047321_P_NODE_8950_length_232_cov_2.075472_g8779_i0 PRJNA1047321 8950 232 2.075472 4.81509504 Malassezia restricta 76775 Fungi Fungi 429 8.2e-116   NTclustered gi|1546636613|ref|XM_027629949.1| 76775 g8779 i0 100 1 232 0 100 0 1 232 286 517 Malassezia restricta mitochondrial hypoxia responsive domain protein (MRET_3322), partial mRNA blastn 232 429 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
14203156 14203156 PRJNA1047321_P_NODE_8532_length_242_cov_0.911243_g8361_i0 PRJNA1047321 8532 242 0.911243 2.20520806 Pascua guehoae 105714 Fungi Fungi 182 2.66e-41   NTclustered gi|2386959624|ref|NC_068697.1| 105714 g8361 i0 84.293 48.0619834710744 191 25 78 5 46 233 24037 24225 Pascua guehoae mitochondrion, complete genome blastn 11631 182 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Pascua Pascua guehoae
15477163 15477163 PRJNA1047321_P_NODE_2653_length_407_cov_1.467066_g2484_i0 PRJNA1047321 2653 407 1.467066 5.97095862 Cylindrobasidium laeve 202712 Fungi Fungi 736 0   NTclustered gi|480327014|gb|JX535037.1| 202712 g2484 i0 99.505 101.226044226044 404 2 99 0 1 404 1397 1800 Cylindrobasidium laeve isolate 2 large subunit ribosomal RNA gene, partial sequence blastn 41199 736 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Physalacriaceae Cylindrobasidium Cylindrobasidium laeve
16312228 16312228 PRJNA1047321_P_NODE_2193_length_454_cov_4.330709_g2024_i0 PRJNA1047321 2193 454 4.330709 19.66141886 Tremellales 5234 Fungi Fungi 660 0   NTclustered gi|501438058|gb|FJ644525.2| 5217 g2024 i0 92.795 109.449339207048 458 29 100 3 1 454 1221 1678 Tremella mesenterica voucher TUB 019108 28S ribosomal RNA gene, partial sequence blastn 49690 660 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Tremellaceae Tremella Tremella mesenterica
16751382 16751382 PRJNA1047321_P_NODE_8514_length_242_cov_0.911243_g8343_i0 PRJNA1047321 8514 242 0.911243 2.20520806 Malassezia restricta 76775 Fungi Fungi 431 2.4e-116   NTclustered gi|1546635244|ref|XM_027629281.1| 76775 g8343 i0 98.76 1.17355371900826 242 3 100 0 1 242 56 297 Malassezia restricta solute carrier family 25, member 39/40 (MRET_2654), partial mRNA blastn 284 431 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
18026264 18026264 PRJNA1047321_P_NODE_8355_length_242_cov_2.331361_g8184_i0 PRJNA1047321 8355 242 2.331361 5.64189362 Kwoniella heveanensis 89924 Fungi Fungi 292 1.18e-74   NTclustered gi|2678476216|gb|CP144515.1| 1296119 g8184 i0 88.43 145.5 242 28 100 0 1 242 1615518 1615277 Kwoniella heveanensis CBS 569 chromosome 2 blastn 35211 292 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Kwoniella Kwoniella heveanensis
20136208 20136208 PRJNA1047321_P_NODE_4776_length_292_cov_1.388128_g4605_i0 PRJNA1047321 4776 292 1.388128 4.05333376 Cylindrobasidium 139105 Fungi Fungi 540 4.74e-149   NTclustered gi|1473265577|gb|MH878521.1| 139106 g4605 i0 100 100.167808219178 292 0 100 0 1 292 625 334 Cylindrobasidium evolvens culture CBS:832.72 strain CBS 832.72 large subunit ribosomal RNA gene, partial sequence blastn 29249 540 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Physalacriaceae Cylindrobasidium Cylindrobasidium evolvens
20575502 20575502 PRJNA1047321_P_NODE_6077_length_258_cov_1.664865_g5906_i0 PRJNA1047321 6077 258 1.664865 4.2953517 Malassezia restricta 76775 Fungi Fungi 472 1.52e-128   NTclustered gi|1546637503|ref|XM_027630394.1| 76775 g5906 i0 99.612 2 258 1 100 0 1 258 13 270 Malassezia restricta uncharacterized protein (MRET_3767), partial mRNA blastn 516 472 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
24400452 24400452 PRJNA1047321_P_NODE_3340_length_358_cov_1.340351_g3170_i0 PRJNA1047321 3340 358 1.340351 4.79845658 Filobasidium wieringae 104416 Fungi Fungi 645 1.2199999999999996e-180   NTclustered gi|2843133256|gb|PQ530069.1| 104416 g3170 i0 99.162 100 358 3 100 0 1 358 447 804 Filobasidium wieringae isolate CHP-0015 large subunit ribosomal RNA gene, partial sequence blastn 35800 645 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Filobasidium Filobasidium wieringae
25236119 25236119 PRJNA1047321_P_NODE_7460_length_246_cov_5.849711_g7289_i0 PRJNA1047321 7460 246 5.849711 14.39028906 Malassezia 55193 Fungi Fungi 455 1.4500000000000002e-123   NTclustered gi|613475760|gb|KJ174372.1| 76773 g7289 i0 100 99.9430894308943 246 0 100 0 1 246 347 592 Malassezia globosa strain KCTC27521 large subunit ribosomal RNA gene, partial sequence blastn 24586 455 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;