RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1047321" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA1047321 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7827041 7827041 PRJNA1047321_P_NODE_4947_length_286_cov_1.276995_g4776_i0 PRJNA1047321 4947 286 1.276995 3.6522057 Deinococcus sp. QL22 2939437 Bacteria Bacteria 490 4.729999999999998e-134   NTclustered gi|2238957582|gb|CP097149.1| 2939437 g4776 i0 97.552 205.003496503497 286 7 100 0 1 286 1362351 1362636 Deinococcus sp. QL22 chromosome, complete genome blastn 58631 490 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. QL22
12928159 12928159 PRJNA1047321_P_NODE_7311_length_247_cov_0.885057_g7140_i0 PRJNA1047321 7311 247 0.885057 2.18609079 Deinococcus sp. AB2017081 3093660 Bacteria Bacteria 254 5.699999999999999e-63   NTclustered gi|2636768990|gb|CP140098.1| 3093660 g7140 i0 86.134 13.2834008097166 238 29 96 4 7 242 2188456 2188221 Deinococcus sp. AB2017081 chromosome, complete genome blastn 3281 254 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. AB2017081

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;