RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA1046144" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 11 ✖

bioproject 1

  • PRJNA1046144 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1009467 1009467 PRJNA1046144_P_NODE_72021_length_198_cov_8.798450_g71726_i0 PRJNA1046144 72021 198 8.79845 17.420931 Betaretrovirus 140052 Viruses Viruses 361 2.51e-95   NTclustered gi|1666023499|gb|MK561030.1| 11856 g71726 i0 99.495 4 198 1 100 0 1 198 2098 2295 Squirrel monkey retrovirus, complete genome blastn 792 361 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
1447558 1447558 PRJNA1046144_P_NODE_67182_length_227_cov_4.556962_g66887_i0 PRJNA1046144 67182 227 4.556962 10.34430374 Betaretrovirus squmon 3427297 Viruses Viruses 420 4.81e-113   NTclustered gi|1666023499|gb|MK561030.1| 11856 g66887 i0 100 4.00440528634361 227 0 100 0 1 227 2079 1853 Squirrel monkey retrovirus, complete genome blastn 909 420 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
3559579 3559579 PRJNA1046144_P_NODE_12463_length_452_cov_6.122715_g12168_i0 PRJNA1046144 12463 452 6.122715 27.6746718 Betaretrovirus 140052 Viruses Viruses 824 0   NTclustered gi|9627014|ref|NC_001514.1| 11856 g12168 i0 99.558 5.23672566371681 452 2 100 0 1 452 8100 7649 Squirrel monkey retrovirus - HLB, complete genome blastn 2367 824 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
7387285 7387285 PRJNA1046144_P_NODE_9266_length_519_cov_4.026667_g8973_i0 PRJNA1046144 9266 519 4.026667 20.89840173 Betaretrovirus 140052 Viruses Viruses 959 0   NTclustered gi|9627014|ref|NC_001514.1| 11856 g8973 i0 100 7.83236994219653 519 0 100 0 1 519 8583 8065 Squirrel monkey retrovirus - HLB, complete genome blastn 4065 959 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
10375524 10375524 PRJNA1046144_P_NODE_37429_length_279_cov_1.800000_g37134_i0 PRJNA1046144 37429 279 1.8 5.022 Betaretrovirus squmon 3427297 Viruses Viruses 516 7.58e-142   NTclustered gi|1666023499|gb|MK561030.1| 11856 g37134 i0 100 3 279 0 100 0 1 279 1034 1312 Squirrel monkey retrovirus, complete genome blastn 837 516 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
12487790 12487790 PRJNA1046144_P_NODE_13030_length_443_cov_2.417112_g12735_i0 PRJNA1046144 13030 443 2.417112 10.70780616 Betaretrovirus 140052 Viruses Viruses 797 0   NTclustered gi|9627014|ref|NC_001514.1| 11856 g12735 i0 99.097 4.08126410835214 443 4 100 0 1 443 1887 1445 Squirrel monkey retrovirus - HLB, complete genome blastn 1808 797 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
12488404 12488404 PRJNA1046144_P_NODE_9270_length_519_cov_2.751111_g8977_i0 PRJNA1046144 9270 519 2.751111 14.27826609 Betaretrovirus 140052 Viruses Viruses 937 0   NTclustered gi|1666023499|gb|MK561030.1| 11856 g8977 i0 99.229 3.11368015414258 519 4 100 0 1 519 3371 2853 Squirrel monkey retrovirus, complete genome blastn 1616 937 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
14201596 14201596 PRJNA1046144_P_NODE_6892_length_601_cov_1.590226_g6603_i0 PRJNA1046144 6892 601 1.590226 9.55725826 Betaretrovirus squmon 3427297 Viruses Viruses 1099 0   NTclustered gi|1666023499|gb|MK561030.1| 11856 g6603 i0 99.667 4.66888519134775 601 2 100 0 1 601 367 967 Squirrel monkey retrovirus, complete genome blastn 2806 1099 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
17586781 17586781 PRJNA1046144_P_NODE_1894_length_1099_cov_3.131068_g1729_i0 PRJNA1046144 1894 1099 3.131068 34.41043732 Betaretrovirus 140052 Viruses Viruses 2019 0   NTclustered gi|9627014|ref|NC_001514.1| 11856 g1729 i0 99.818 4 1099 2 100 0 1 1099 7594 6496 Squirrel monkey retrovirus - HLB, complete genome blastn 4396 2019 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
18860724 18860724 PRJNA1046144_P_NODE_3415_length_836_cov_4.744459_g3179_i0 PRJNA1046144 3415 836 4.744459 39.66367724 Betaretrovirus 140052 Viruses Viruses 1535 0   NTclustered gi|9627014|ref|NC_001514.1| 11856 g3179 i0 99.761 4.06459330143541 838 0 100 2 1 836 3617 4454 Squirrel monkey retrovirus - HLB, complete genome blastn 3398 1535 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
25235501 25235501 PRJNA1046144_P_NODE_4480_length_739_cov_3.495522_g4215_i0 PRJNA1046144 4480 739 3.495522 25.83190758 Betaretrovirus 140052 Viruses Viruses 1360 0   NTclustered gi|9627014|ref|NC_001514.1| 11856 g4215 i0 99.865 4.20297699594046 739 1 100 0 1 739 6236 5498 Squirrel monkey retrovirus - HLB, complete genome blastn 3106 1360 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;