RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1044115" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1044115 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7824278 7824278 PRJNA1044115_P_NODE_40787_length_243_cov_1.470588_g40603_i0 PRJNA1044115 40787 243 1.470588 3.57352884 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 65.8 2.81e-6   NTclustered gi|1619629242|ref|XM_021041569.2| 2652724 g40603 i0 84.615 0.267489711934156 65 10 27 0 132 196 1539 1475 PREDICTED: Exaiptasia diaphana F-box-like/WD repeat-containing protein TBL1XR1 (LOC110236088), mRNA blastn 65 65.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
11649791 11649791 PRJNA1044115_P_NODE_19210_length_333_cov_1.200000_g19026_i0 PRJNA1044115 19210 333 1.2 3.996 Orbicella faveolata 48498 Cnidaria other_Eukaryota 174 6.42e-39   NTclustered gi|1176120142|ref|XM_020775684.1| 48498 g19026 i0 82.673 40.1471471471471 202 29 60 6 111 309 264 462 PREDICTED: Orbicella faveolata alanine--tRNA ligase, cytoplasmic-like (LOC110068304), mRNA blastn 13369 174 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;