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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1044115" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA1044115 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2284023 2284023 PRJNA1044115_P_NODE_16742_length_357_cov_4.904930_g16558_i0 PRJNA1044115 16742 357 4.90493 17.5106001 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 287 8.51e-73   NTclustered gi|161736|gb|L01416.1|TETBTUBUB 5911 g16558 i0 83.495 61.7422969187675 309 50 86 1 6 313 438 130 Tetrahymena thermophila beta-tubulin (BTU2) gene, complete cds blastn 22042 287 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
6549245 6549245 PRJNA1044115_P_NODE_13346_length_405_cov_5.253012_g13162_i0 PRJNA1044115 13346 405 5.253012 21.2746986 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 732 0   NTclustered gi|10782|emb|X54004.1| 5908 g13162 i0 99.259 90.4074074074074 405 3 100 0 1 405 1918 1514 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 36615 732 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
8662022 8662022 PRJNA1044115_P_NODE_8547_length_524_cov_104.949002_g8365_i0 PRJNA1044115 8547 524 104.949002 549.93277048 Euplotes 5935 SAR_Eukaryotes SAR_Eukaryotes 963 0   NTclustered gi|1516250946|gb|MK177633.1| 343864 g8365 i0 99.809 101.030534351145 524 1 100 0 1 524 603 1126 Uncultured Euplotes sp. clone DDI217.fa small subunit ribosomal RNA gene, partial sequence blastn 52940 968 0.994834710743802 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes uncultured Euplotes sp.
9099265 9099265 PRJNA1044115_P_NODE_848_length_1590_cov_6.870138_g800_i0 PRJNA1044115 848 1590 6.870138 109.2351942 Spirostomum yagiui 1471042 SAR_Eukaryotes SAR_Eukaryotes 113 7.39e-20   NTclustered gi|2692944869|ref|NC_086648.1| 1471042 g800 i0 85.981 8.16415094339623 107 14 7 1 950 1055 3975 3869 Spirostomum yagiui isolate XKC mitochondrion, complete genome blastn 12981 113 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Spirostomidae Spirostomum Spirostomum yagiui
15036544 15036544 PRJNA1044115_P_NODE_43832_length_219_cov_17.000000_g43648_i0 PRJNA1044115 43832 219 17 37.23 Euplotes 5935 SAR_Eukaryotes SAR_Eukaryotes 405 1.29e-108   NTclustered gi|1333898193|gb|MG827339.1| 178273 g43648 i0 100 100.009132420091 219 0 100 0 1 219 161 379 Euplotes sp. strain SLS1 small subunit ribosomal RNA gene, partial sequence blastn 21902 405 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes sp.
18023396 18023396 PRJNA1044115_P_NODE_37075_length_248_cov_76.788571_g36891_i0 PRJNA1044115 37075 248 76.788571 190.43565608 Euplotes aediculatus 5940 SAR_Eukaryotes SAR_Eukaryotes 403 5.38e-108   NTclustered gi|6980030|gb|AF223571.1|AF223571 5940 g36891 i0 95.984 101.213709677419 249 9 100 1 1 248 3424 3176 Euplotes aediculatus internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 25101 403 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes aediculatus
20572687 20572687 PRJNA1044115_P_NODE_3557_length_851_cov_762.863753_g3409_i0 PRJNA1044115 3557 851 762.863753 6491.97053803 Euplotes encysticus 440145 SAR_Eukaryotes SAR_Eukaryotes 1273 0   NTclustered gi|1233819925|gb|KX516617.1| 440145 g3409 i0 100 74.4112808460634 689 0 81 0 1 689 689 1 Euplotes encysticus isolate B555 large subunit ribosomal RNA gene, partial sequence blastn 63324 1273 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes encysticus
20572849 20572849 PRJNA1044115_P_NODE_997_length_1503_cov_36.783217_g939_i0 PRJNA1044115 997 1503 36.783217 552.85175151 Euplotes vanleeuwenhoeki 2794224 SAR_Eukaryotes SAR_Eukaryotes 425 7.89e-114   NTclustered gi|2055401904|ref|NC_056101.1| 2794224 g939 i0 77.068 13.3313373253493 798 146 77 30 527 1308 17756 18532 Euplotes vanleeuwenhoeki strain KKR18 mitochondrion, complete genome blastn 20037 425 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes vanleeuwenhoeki
24397216 24397216 PRJNA1044115_P_NODE_10660_length_461_cov_286.564433_g10476_i0 PRJNA1044115 10660 461 286.564433 1321.06203613 Euplotes aediculatus 5940 SAR_Eukaryotes SAR_Eukaryotes 490 7.999999999999998e-134   NTclustered gi|6980030|gb|AF223571.1|AF223571 5940 g10476 i0 91.008 39.590021691974 367 27 79 6 75 437 3581 3945 Euplotes aediculatus internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 18251 490 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes aediculatus
24397226 24397226 PRJNA1044115_P_NODE_11380_length_444_cov_7.730458_g11196_i0 PRJNA1044115 11380 444 7.730458 34.32323352 Tetrahymena sp. KGE15 1200497 SAR_Eukaryotes SAR_Eukaryotes 808 0   NTclustered gi|523704203|emb|HE861887.1| 1200497 g11196 i0 99.549 85.213963963964 443 2 99 0 2 444 485 43 Tetrahymena sp. KGE15 partial 28S rRNA gene, strain KGE15 blastn 37835 808 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena sp. KGE15
24397519 24397519 PRJNA1044115_P_NODE_30840_length_265_cov_1.218750_g30656_i0 PRJNA1044115 30840 265 1.21875 3.2296875 Tetrahymena pigmentosa 5907 SAR_Eukaryotes SAR_Eukaryotes 387 5.85e-103   NTclustered gi|114329902|ref|NC_008339.1| 5907 g30656 i0 93.487 32.222641509434 261 15 98 1 1 261 1812 1554 Tetrahymena pigmentosa mitochondrion, complete genome blastn 8539 387 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa
25235038 25235038 PRJNA1044115_P_NODE_18900_length_335_cov_488.232824_g18716_i0 PRJNA1044115 18900 335 488.232824 1635.5799604 Euplotes 5935 SAR_Eukaryotes SAR_Eukaryotes 614 3.209999999999999e-171   NTclustered gi|1233819925|gb|KX516617.1| 440145 g18716 i0 99.701 99.7611940298507 335 1 100 0 1 335 672 1006 Euplotes encysticus isolate B555 large subunit ribosomal RNA gene, partial sequence blastn 33420 614 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes encysticus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;