RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1041773" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1041773 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2721385 2721385 PRJNA1041773_P_NODE_84403_length_248_cov_0.880000_g84070_i0 PRJNA1041773 84403 248 0.88 2.1824 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.022   NTclustered gi|687542916|emb|LK643079.1| 57078 g84070 i0 100 0.112903225806452 28 0 11 0 128 155 31 58 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0226412 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
6548782 6548782 PRJNA1041773_P_NODE_72566_length_258_cov_1.275676_g72233_i0 PRJNA1041773 72566 258 1.275676 3.29124408 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 56.5 0.002   NTclustered gi|690868573|emb|LN370122.1| 99802 g72233 i0 100 0.116279069767442 30 0 12 0 210 239 640 611 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0136321 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
9098298 9098298 PRJNA1041773_P_NODE_70788_length_261_cov_1.122340_g70455_i0 PRJNA1041773 70788 261 1.12234 2.9293074 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 54.7 0.007   NTclustered gi|687484592|emb|LK662766.1| 57078 g70455 i0 94.444 0.137931034482759 36 0 13 2 9 43 788 754 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0243520 blastn 36 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
23960740 23960740 PRJNA1041773_P_NODE_37799_length_343_cov_2.292593_g37466_i0 PRJNA1041773 37799 343 2.292593 7.86359399 Metazoa 33208 Platyhelminthes Platyhelminthes 606 5.519999999999998e-169   NTclustered gi|60687563|gb|AY914894.1| 6182 g37466 i0 99.112 98.5481049562682 338 2 99 1 4 341 27 363 Schistosoma japonicum unknown mRNA blastn 33802 610 0.99344262295082 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;