contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA1041773" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1445588 | 1445588 | PRJNA1041773_P_NODE_84702_length_248_cov_0.880000_g84369_i0 | PRJNA1041773 | 84702 | 248 | 0.88 | 2.1824 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 211 | 3.5e-50 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g84369 | i0 | 85.047 | 38.3709677419355 | 214 | 25 | 84 | 4 | 40 | 248 | 6276760 | 6276971 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 9516 | 211 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 2721499 | 2721499 | PRJNA1041773_P_NODE_92403_length_245_cov_0.883721_g92070_i0 | PRJNA1041773 | 92403 | 245 | 0.883721 | 2.16511645 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 119 | 2.15e-22 | NTclustered | gi|2518556548|emb|OX638380.1| | 412056 | g92070 | i0 | 80.519 | 5.77959183673469 | 154 | 30 | 63 | 0 | 8 | 161 | 3347427 | 3347580 | MAG: uncultured Verrucomicrobiae bacterium isolate efd5e50e-5b6a-4a0f-a0a2-e496bae301b3 genome assembly, chromosome: 1 | blastn | 1416 | 119 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 9098263 | 9098263 | PRJNA1041773_P_NODE_68768_length_264_cov_1.612565_g68435_i0 | PRJNA1041773 | 68768 | 264 | 1.612565 | 4.2571716 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 305 | 1.68e-78 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g68435 | i0 | 87.594 | 1.9280303030303 | 266 | 30 | 100 | 3 | 1 | 264 | 10014963 | 10015227 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 509 | 305 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 10374154 | 10374154 | PRJNA1041773_P_NODE_85349_length_248_cov_0.880000_g85016_i0 | PRJNA1041773 | 85349 | 248 | 0.88 | 2.1824 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2051370031|gb|CP072028.1| | 239935 | g85016 | i0 | 100 | 0.225806451612903 | 28 | 0 | 11 | 0 | 75 | 102 | 432415 | 432442 | Akkermansia muciniphila strain Akk1756 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 10374356 | 10374356 | PRJNA1041773_P_NODE_98569_length_242_cov_0.911243_g98236_i0 | PRJNA1041773 | 98569 | 242 | 0.911243 | 2.20520806 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 207 | 4.4e-49 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g98236 | i0 | 82.591 | 4.98760330578512 | 247 | 31 | 99 | 8 | 2 | 242 | 2602674 | 2602434 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 1207 | 207 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 18022849 | 18022849 | PRJNA1041773_P_NODE_89055_length_246_cov_0.890173_g88722_i0 | PRJNA1041773 | 89055 | 246 | 0.890173 | 2.18982558 | uncultured Opitutaceae bacterium | 333967 | Bacteria | Bacteria | 135 | 2.14e-27 | NTclustered | gi|2518551946|emb|OX638348.1| | 333967 | g88722 | i0 | 92.632 | 30.2764227642276 | 95 | 6 | 38 | 1 | 151 | 244 | 427402 | 427308 | MAG: uncultured Opitutaceae bacterium isolate b1b57f99-08c0-43d1-969e-fd0ef39b1292 genome assembly, chromosome: 1 | blastn | 7448 | 135 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | uncultured Opitutaceae bacterium | ||
| 19296346 | 19296346 | PRJNA1041773_P_NODE_57816_length_284_cov_1.459716_g57483_i0 | PRJNA1041773 | 57816 | 284 | 1.459716 | 4.14559344 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 261 | 4e-65 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g57483 | i0 | 84 | 6.70422535211268 | 275 | 40 | 95 | 4 | 1 | 271 | 402471 | 402745 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 1904 | 261 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 20572271 | 20572271 | PRJNA1041773_P_NODE_97697_length_242_cov_1.556213_g97364_i0 | PRJNA1041773 | 97697 | 242 | 1.556213 | 3.76603546 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 265 | 2.5699999999999997e-66 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g97364 | i0 | 86.42 | 12.6115702479339 | 243 | 31 | 100 | 2 | 1 | 242 | 5797945 | 5798186 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 3052 | 265 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 24396742 | 24396742 | PRJNA1041773_P_NODE_68120_length_265_cov_1.604167_g67787_i0 | PRJNA1041773 | 68120 | 265 | 1.604167 | 4.25104255 | Humisphaera borealis | 2807512 | Bacteria | Bacteria | 294 | 3.64e-75 | NTclustered | gi|1927742986|gb|CP063458.1| | 2807512 | g67787 | i0 | 87.5 | 16.0415094339623 | 256 | 30 | 96 | 2 | 8 | 262 | 1749512 | 1749766 | Humisphaera borealis strain M1803 chromosome, complete genome | blastn | 4251 | 294 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;