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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1041773" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA1041773 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2721414 2721414 PRJNA1041773_P_NODE_86603_length_247_cov_0.885057_g86270_i0 PRJNA1041773 86603 247 0.885057 2.18609079 Candidatus Bipolaricaulis anaerobius 2026885 Bacteria Bacteria 126 1.2999999999999998e-24   NTclustered gi|1403730514|emb|LS483254.1| 2026885 g86270 i0 85.714 0.595141700404858 119 17 48 0 43 161 1230881 1230999 Candidatus Acetothermia bacterium Ran1 isolate BARAN1 MAG genome assembly, chromosome: BARAN1 blastn 147 126 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota Candidatus Bipolaricaulia Candidatus Bipolaricaulales Candidatus Bipolaricaulaceae Candidatus Bipolaricaulis Candidatus Bipolaricaulis anaerobius
3997501 3997501 PRJNA1041773_P_NODE_92004_length_245_cov_0.895349_g91671_i0 PRJNA1041773 92004 245 0.895349 2.19360505 Candidatus Bipolaricaulis anaerobius 2026885 Bacteria Bacteria 228 3.4199999999999995e-55   NTclustered gi|1403730514|emb|LS483254.1| 2026885 g91671 i0 87.065 0.820408163265306 201 26 82 0 1 201 513307 513107 Candidatus Acetothermia bacterium Ran1 isolate BARAN1 MAG genome assembly, chromosome: BARAN1 blastn 201 228 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota Candidatus Bipolaricaulia Candidatus Bipolaricaulales Candidatus Bipolaricaulaceae Candidatus Bipolaricaulis Candidatus Bipolaricaulis anaerobius
6548680 6548680 PRJNA1041773_P_NODE_66406_length_268_cov_1.579487_g66073_i0 PRJNA1041773 66406 268 1.579487 4.23302516 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 303 6.14e-78   NTclustered gi|2306681518|gb|CP075337.1| 2980174 g66073 i0 87.218 5.91791044776119 266 34 99 0 1 266 372216 371951 Candidatus Saccharibacteria bacterium TM7i chromosome, complete genome blastn 1586 303 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i
9098022 9098022 PRJNA1041773_P_NODE_52388_length_296_cov_1.538117_g52055_i0 PRJNA1041773 52388 296 1.538117 4.55282632 Candidatus Bipolaricaulis sibiricus 2501609 Bacteria Bacteria 303 6.87e-78   NTclustered gi|1560905428|gb|CP034928.1| 2501609 g52055 i0 87.739 0.881756756756757 261 30 88 2 37 296 1502008 1502267 MAG: Candidatus Bipolaricaulis sibiricus isolate Ch78 chromosome, complete genome blastn 261 303 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota Candidatus Bipolaricaulia Candidatus Bipolaricaulales Candidatus Bipolaricaulaceae Candidatus Bipolaricaulis Candidatus Bipolaricaulis sibiricus
11648645 11648645 PRJNA1041773_P_NODE_31370_length_374_cov_1.023256_g31038_i0 PRJNA1041773 31370 374 1.023256 3.82697744 Candidatus Bipolaricaulis sibiricus 2501609 Bacteria Bacteria 272 2.51e-68   NTclustered gi|1560905428|gb|CP034928.1| 2501609 g31038 i0 80.267 1.00267379679144 375 63 98 6 10 374 1502410 1502783 MAG: Candidatus Bipolaricaulis sibiricus isolate Ch78 chromosome, complete genome blastn 375 272 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota Candidatus Bipolaricaulia Candidatus Bipolaricaulales Candidatus Bipolaricaulaceae Candidatus Bipolaricaulis Candidatus Bipolaricaulis sibiricus
23960798 23960798 PRJNA1041773_P_NODE_45179_length_317_cov_0.901639_g44846_i0 PRJNA1041773 45179 317 0.901639 2.85819563 Candidatus Bipolaricaulis 2250122 Bacteria Bacteria 130 1.33e-25   NTclustered gi|1403730514|emb|LS483254.1| 2026885 g44846 i0 93.182 15.0788643533123 88 6 28 0 127 214 441559 441646 Candidatus Acetothermia bacterium Ran1 isolate BARAN1 MAG genome assembly, chromosome: BARAN1 blastn 4780 130 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota Candidatus Bipolaricaulia Candidatus Bipolaricaulales Candidatus Bipolaricaulaceae Candidatus Bipolaricaulis Candidatus Bipolaricaulis anaerobius

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;