RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1040136" and tax_phylum = "Cossaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1040136 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9936235 9936235 PRJNA1040136_S_NODE_2148_length_256_cov_1.387978_g2145_i0 PRJNA1040136 2148 256 1.387978 3.55322368 Viruses 10239 Viruses Viruses 453 5.460000000000001e-123   NTclustered gi|2496529063|gb|OP577481.1| 3042448 g2145 i0 99.206 2.6328125 252 1 98 1 1 251 990 739 Psittaciform parvoviridae sp. strain OBP1/FE1/44/2021, partial genome blastn 674 453 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Psittaciform parvoviridae sp.
12487005 12487005 PRJNA1040136_S_NODE_2250_length_252_cov_1.949721_g2247_i0 PRJNA1040136 2250 252 1.949721 4.91329692 Viruses 10239 Viruses Viruses 466 6.89e-127   NTclustered gi|2496529063|gb|OP577481.1| 3042448 g2247 i0 100 3 252 0 100 0 1 252 2327 2578 Psittaciform parvoviridae sp. strain OBP1/FE1/44/2021, partial genome blastn 756 466 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Psittaciform parvoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;