contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA1036688" and tax_phylum = "Acidobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169635 | 169635 | PRJNA1036688_P_NODE_2061_length_487_cov_5.811111_g1774_i0 | PRJNA1036688 | 2061 | 487 | 5.811111 | 28.30011057 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 702 | 0 | NTclustered | gi|2874253677|emb|OY969111.1| | 171953 | g1774 | i0 | 92.961 | 129.932238193018 | 483 | 33 | 99 | 1 | 5 | 487 | 716205 | 715724 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.3 genome assembly, chromosome: 1 | blastn | 63277 | 702 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 1008067 | 1008067 | PRJNA1036688_P_NODE_1061_length_685_cov_28.274691_g823_i0 | PRJNA1036688 | 1061 | 685 | 28.274691 | 193.68163335 | Granulicella | 940557 | Bacteria | Bacteria | 1206 | 0 | NTclustered | gi|2626255659|emb|OY843766.1| | 1241325 | g823 | i0 | 98.676 | 106.937226277372 | 680 | 9 | 99 | 0 | 6 | 685 | 3194361 | 3195040 | MAG: uncultured Granulicella sp. isolate e6d70442-04f8-4699-a368-e2225de37168 genome assembly, chromosome: 1 | blastn | 73252 | 1206 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Granulicella | uncultured Granulicella sp. | ||
| 4836123 | 4836123 | PRJNA1036688_P_NODE_1464_length_585_cov_6.941606_g1193_i0 | PRJNA1036688 | 1464 | 585 | 6.941606 | 40.6083951 | Bacteria | 2 | Bacteria | Bacteria | 876 | 0 | NTclustered | gi|1015624362|gb|AH012920.2| | 171953 | g1193 | i0 | 93.592 | 104.873504273504 | 593 | 29 | 100 | 3 | 1 | 585 | 31128 | 30537 | Uncultured Acidobacteria bacterium clone 46h5 hypothetical protein, putative O-linked GlcNAc transferase, putative two-component response regulator, hypothetical protein, putative penicillin-resistance DD-carboxypeptidase, putative glycosyl transferase, hypothetical protein, conserved hypothetical protein, hypothetical protein, putative MaoC family dehydratase, putative D-3-phosphoglycerate dehydrogenase, putative magnesium and cobalt transport protein, putative phosphatidyl-glycerophosphatase, putative 2-methylthioadenine synthetase, hypothetical protein, putative glutamine cyclotransferase, and hypothetical protein genes, complete cds; 5S ribosomal RNA, 23S ribosomal RNA, tRNA-Ala, tRNA-Met, tRNA-Ile, and 16S ribosomal RNA genes, complete sequence; and hypothetical protein genes, complete cds | blastn | 61351 | 876 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 6547704 | 6547704 | PRJNA1036688_P_NODE_4246_length_304_cov_3.715356_g3954_i0 | PRJNA1036688 | 4246 | 304 | 3.715356 | 11.29468224 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 503 | 6.51e-138 | NTclustered | gi|1958093598|gb|CP065003.1| | 1978231 | g3954 | i0 | 96.417 | 99.7335526315789 | 307 | 7 | 100 | 3 | 1 | 304 | 318084 | 317779 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome | blastn | 30319 | 503 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 6547743 | 6547743 | PRJNA1036688_P_NODE_9346_length_177_cov_1.392857_g9054_i0 | PRJNA1036688 | 9346 | 177 | 1.392857 | 2.46535689 | Thermoanaerobaculaceae bacterium | 2699758 | Bacteria | Bacteria | 165 | 1.84e-36 | NTclustered | gi|2874254005|emb|OY970330.1| | 2699758 | g9054 | i0 | 83.616 | 112.463276836158 | 177 | 27 | 99 | 2 | 1 | 175 | 4575220 | 4575044 | MAG: Thermoanaerobaculaceae bacterium isolate MFD05537.bin.c.1 genome assembly, chromosome: 1 | blastn | 19906 | 165 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Thermoanaerobaculia | Thermoanaerobaculales | Thermoanaerobaculaceae | Thermoanaerobaculaceae bacterium | |||
| 7822289 | 7822289 | PRJNA1036688_P_NODE_5927_length_242_cov_1.126829_g5635_i0 | PRJNA1036688 | 5927 | 242 | 1.126829 | 2.72692618 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 220 | 5.65e-53 | NTclustered | gi|2874253885|emb|OY970060.1| | 171953 | g5635 | i0 | 83.197 | 3.05785123966942 | 244 | 38 | 100 | 2 | 1 | 242 | 4840459 | 4840701 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 | blastn | 740 | 220 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 9097272 | 9097272 | PRJNA1036688_P_NODE_688_length_869_cov_15.455529_g487_i0 | PRJNA1036688 | 688 | 869 | 15.455529 | 134.30854701 | uncultured Granulicella sp. | 1241325 | Bacteria | Bacteria | 894 | 0 | NTclustered | gi|2836016418|emb|OZ196148.1| | 1241325 | g487 | i0 | 85.617 | 121.413118527043 | 883 | 91 | 99 | 25 | 6 | 869 | 506238 | 507103 | MAG: uncultured Granulicella sp. isolate 9057d4d9-b77b-4c6f-b84b-ea5519435b63 genome assembly, chromosome: 1 | blastn | 105508 | 894 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Granulicella | uncultured Granulicella sp. | ||
| 18021537 | 18021537 | PRJNA1036688_P_NODE_5195_length_266_cov_2.000000_g4903_i0 | PRJNA1036688 | 5195 | 266 | 2 | 5.32 | Thermoanaerobaculia bacterium | 2651171 | Bacteria | Bacteria | 405 | 1.62e-108 | NTclustered | gi|2874253700|emb|OY969426.1| | 2651171 | g4903 | i0 | 94.318 | 99.2669172932331 | 264 | 15 | 99 | 0 | 3 | 266 | 2972175 | 2972438 | MAG: Thermoanaerobaculia bacterium isolate MFD02979.bin.c.1 genome assembly, chromosome: 1 | blastn | 26405 | 405 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Thermoanaerobaculia | Thermoanaerobaculia bacterium | |||||
| 23121926 | 23121926 | PRJNA1036688_P_NODE_3759_length_332_cov_3.064407_g3468_i0 | PRJNA1036688 | 3759 | 332 | 3.064407 | 10.17383124 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 315 | 3.61e-81 | NTclustered | gi|2621707050|emb|OY764903.1| | 2212468 | g3468 | i0 | 88.716 | 73 | 257 | 29 | 77 | 0 | 76 | 332 | 3559060 | 3559316 | MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 | blastn | 24236 | 315 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 24395701 | 24395701 | PRJNA1036688_P_NODE_2140_length_476_cov_3.603645_g1851_i0 | PRJNA1036688 | 2140 | 476 | 3.603645 | 17.1533502 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 592 | 2.2099999999999998e-164 | NTclustered | gi|217038907|gb|EU810998.1| | 171953 | g1851 | i0 | 99.387 | 410.365546218487 | 326 | 2 | 68 | 0 | 1 | 326 | 326 | 1 | Uncultured Acidobacteria bacterium clone 01QCK 23S ribosomal RNA gene, partial sequence | blastn | 195334 | 592 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 24395705 | 24395705 | PRJNA1036688_P_NODE_2480_length_436_cov_14.288221_g2191_i0 | PRJNA1036688 | 2480 | 436 | 14.288221 | 62.29664356 | uncultured Granulicella sp. | 1241325 | Bacteria | Bacteria | 712 | 0 | NTclustered | gi|2836016418|emb|OZ196148.1| | 1241325 | g2191 | i0 | 96.101 | 146.325688073395 | 436 | 17 | 100 | 0 | 1 | 436 | 505579 | 506014 | MAG: uncultured Granulicella sp. isolate 9057d4d9-b77b-4c6f-b84b-ea5519435b63 genome assembly, chromosome: 1 | blastn | 63798 | 712 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Granulicella | uncultured Granulicella sp. | ||
| 25234302 | 25234302 | PRJNA1036688_P_NODE_12260_length_150_cov_1.840708_g11968_i0 | PRJNA1036688 | 12260 | 150 | 1.840708 | 2.761062 | Luteitalea | 2004797 | Bacteria | Bacteria | 244 | 1.88e-60 | NTclustered | gi|1016914409|gb|CP015136.1| | 1855912 | g11968 | i0 | 96.026 | 272.713333333333 | 151 | 4 | 100 | 2 | 1 | 150 | 654614 | 654763 | Luteitalea pratensis strain DSM 100886 chromosome, complete genome | blastn | 40907 | 244 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacteraceae | Luteitalea | Luteitalea pratensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;