RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1036688" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 6 ✖

bioproject 1

  • PRJNA1036688 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1444334 1444334 PRJNA1036688_P_NODE_522_length_1004_cov_7.301965_g345_i0 PRJNA1036688 522 1004 7.301965 73.3117286 Shenzhen dicistro-like virus 2789378 Viruses Viruses 1633 0   NTclustered gi|1935607040|gb|MT747995.1| 2789378 g345 i0 96.108 4.03685258964143 1002 37 99 2 3 1003 9276 8276 Shenzhen dicistro-like virus strain USAdp-3 polyprotein gene, complete cds blastn 4053 1633 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Shenzhen dicistro-like virus
3996132 3996132 PRJNA1036688_P_NODE_11804_length_154_cov_0.991453_g11512_i0 PRJNA1036688 11804 154 0.991453 1.52683762 Shenzhen dicistro-like virus 2789378 Viruses Viruses 235 1.17e-57   NTclustered gi|1935607040|gb|MT747995.1| 2789378 g11512 i0 94.156 1.87662337662338 154 9 100 0 1 154 6872 6719 Shenzhen dicistro-like virus strain USAdp-3 polyprotein gene, complete cds blastn 289 235 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Shenzhen dicistro-like virus
6547691 6547691 PRJNA1036688_P_NODE_12266_length_150_cov_1.707965_g11974_i0 PRJNA1036688 12266 150 1.707965 2.5619475 Shenzhen dicistro-like virus 2789378 Viruses Viruses 200 4.119999999999999e-47   NTclustered gi|1935607040|gb|MT747995.1| 2789378 g11974 i0 90.667 1 150 14 100 0 1 150 7377 7228 Shenzhen dicistro-like virus strain USAdp-3 polyprotein gene, complete cds blastn 150 200 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Shenzhen dicistro-like virus
9097231 9097231 PRJNA1036688_P_NODE_1688_length_543_cov_3.138340_g1406_i0 PRJNA1036688 1688 543 3.13834 17.0411862 Shenzhen dicistro-like virus 2789378 Viruses Viruses 865 0   NTclustered gi|1935607040|gb|MT747995.1| 2789378 g1406 i0 95.396 3.83241252302026 543 25 100 0 1 543 7707 8249 Shenzhen dicistro-like virus strain USAdp-3 polyprotein gene, complete cds blastn 2081 865 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Shenzhen dicistro-like virus
20570839 20570839 PRJNA1036688_P_NODE_5817_length_245_cov_1.985577_g5525_i0 PRJNA1036688 5817 245 1.985577 4.86466365 Ripasluq virus 3131229 Viruses Viruses 270 5.609999999999999e-68   NTclustered gi|2717321969|gb|PP173531.1| 3131229 g5525 i0 86.777 473.975510204082 242 32 99 0 3 244 3240 2999 MAG: Ripasluq virus isolate MP3_k141_106077 genomic sequence blastn 116124 270 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripasluq virus
23121894 23121894 PRJNA1036688_P_NODE_10099_length_169_cov_1.174242_g9807_i0 PRJNA1036688 10099 169 1.174242 1.98446898 Shenzhen dicistro-like virus 2789378 Viruses Viruses 235 1.31e-57   NTclustered gi|1940197836|gb|MT721845.1| 2789378 g9807 i0 91.716 3 169 14 100 0 1 169 4275 4107 Shenzhen dicistro-like virus polyprotein gene, complete cds blastn 507 235 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Shenzhen dicistro-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;