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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA1036688" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 20 ✖

bioproject 1

  • PRJNA1036688 · 20 ✖

analysis 1

  • blastn · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
169673 169673 PRJNA1036688_P_NODE_8021_length_195_cov_2.443038_g7729_i0 PRJNA1036688 8021 195 2.443038 4.7639241 Sarcocystis asinus 2925352 SAR_Eukaryotes SAR_Eukaryotes 71.3 4.65e-8   NTclustered gi|2206936643|gb|OM971684.1| 2925352 g7729 i0 84.507 3.92820512820513 71 11 36 0 53 123 1686 1616 Sarcocystis asinus isolate YDDSa2 large subunit ribosomal RNA gene, partial sequence blastn 766 71.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis asinus
1444339 1444339 PRJNA1036688_P_NODE_6242_length_233_cov_2.219388_g5950_i0 PRJNA1036688 6242 233 2.219388 5.17117404 Cercomonas agilis 310805 SAR_Eukaryotes SAR_Eukaryotes 254 5.33e-63   NTclustered gi|58414956|gb|AY748813.1| 310805 g5950 i0 86.266 161.583690987124 233 32 100 0 1 233 3 235 Cercomonas agilis polyubiquitin (UBQ) gene, partial cds blastn 37649 254 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas agilis
2283328 2283328 PRJNA1036688_P_NODE_4402_length_298_cov_2.938697_g4110_i0 PRJNA1036688 4402 298 2.938697 8.75731706 Colpodida 88566 SAR_Eukaryotes SAR_Eukaryotes 542 1.35e-149   NTclustered gi|156499055|gb|EU039885.1| 459237 g4110 i0 99.333 100.395973154362 300 0 100 2 1 298 51 350 Bresslauides discoideus 18S ribosomal RNA gene, partial sequence; macronuclear blastn 29918 542 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Hausmanniellidae Bresslauides Bresslauides discoideus
3996183 3996183 PRJNA1036688_P_NODE_8024_length_195_cov_2.348101_g7732_i0 PRJNA1036688 8024 195 2.348101 4.57879695 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 361 2.46e-95   NTclustered gi|67090779|gb|DQ007471.1| 65357 g7732 i0 100 40.174358974359 195 0 100 0 1 195 417 611 Albugo candida isolate F20 large subunit ribosomal RNA gene, partial sequence blastn 7834 361 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
5272480 5272480 PRJNA1036688_P_NODE_11845_length_153_cov_2.344828_g11553_i0 PRJNA1036688 11845 153 2.344828 3.58758684 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 283 4.0799999999999995e-72   NTclustered gi|338797988|gb|HQ665049.1| 65357 g11553 i0 100 99.4901960784314 153 0 100 0 1 153 1388 1236 Albugo candida isolate AC2V 28S large subunit ribosomal RNA gene, partial sequence blastn 15222 283 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
5272499 5272499 PRJNA1036688_P_NODE_3645_length_338_cov_4.382060_g3354_i0 PRJNA1036688 3645 338 4.38206 14.8113628 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.91e-4   NTclustered gi|1931714359|ref|XR_552297.2| 54757 g3354 i0 86.792 2.5207100591716 53 7 16 0 171 223 4102 4050 Plasmodium vinckei vinckei ribosomal RNA (PVVCY_0502190), rRNA blastn 852 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
6547678 6547678 PRJNA1036688_P_NODE_10966_length_161_cov_1.072581_g10674_i0 PRJNA1036688 10966 161 1.072581 1.72685541 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 248 1.59e-61   NTclustered gi|820695469|tpe|LN714488.1| 572307 g10674 i0 94.41 1 161 9 100 0 1 161 80247 80407 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 161 248 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
7822312 7822312 PRJNA1036688_P_NODE_8967_length_182_cov_1.048276_g8675_i0 PRJNA1036688 8967 182 1.048276 1.90786232 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 287 3.9e-73   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g8675 i0 95.055 3.53846153846154 182 9 100 0 1 182 2007 2188 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 644 287 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
10372931 10372931 PRJNA1036688_P_NODE_8629_length_186_cov_2.322148_g8337_i0 PRJNA1036688 8629 186 2.322148 4.31919528 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 292 8.61e-75   NTclustered gi|2651357788|gb|PP174303.1| 41631 g8337 i0 95.161 45.8225806451613 186 7 100 2 1 186 3368 3551 Colpoda sp. isolate CIL1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8523 292 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
11648193 11648193 PRJNA1036688_P_NODE_6530_length_225_cov_1.909574_g6238_i0 PRJNA1036688 6530 225 1.909574 4.2965415 Lamtostyla gui 2678605 SAR_Eukaryotes SAR_Eukaryotes 327 2.97e-85   NTclustered gi|1778223994|gb|MN733822.1| 2678605 g6238 i0 92.889 100.133333333333 225 16 100 0 1 225 4923 4699 Lamtostyla gui isolate LWY2015111409 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22530 327 1 Eukaryota Sar   Ciliophora Spirotrichea Stichotrichida Amphisiellidae Lamtostyla Lamtostyla gui
14198254 14198254 PRJNA1036688_P_NODE_4232_length_305_cov_2.104478_g3940_i0 PRJNA1036688 4232 305 2.104478 6.4186579 Cercomonas sp. 1979794 SAR_Eukaryotes SAR_Eukaryotes 267 9.33e-67   NTclustered gi|2651357794|gb|PP174308.1| 1979794 g3940 i0 82.736 87.8852459016394 307 45 100 7 1 305 3587 3887 Cercomonas sp. isolate JGP5 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 26805 267 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp.
15035754 15035754 PRJNA1036688_P_NODE_10552_length_164_cov_2.425197_g10260_i0 PRJNA1036688 10552 164 2.425197 3.97732308 Spumella 89043 SAR_Eukaryotes SAR_Eukaryotes 303 3.42e-78   NTclustered gi|300713466|gb|GQ902928.1| 152704 g10260 i0 100 33.1829268292683 164 0 100 0 1 164 47 210 Uncultured stramenopile clone Ac-C2 28S ribosomal RNA gene, partial sequence blastn 5442 303 1 Eukaryota Sar             uncultured stramenopile
15472506 15472506 PRJNA1036688_P_NODE_6953_length_215_cov_2.196629_g6661_i0 PRJNA1036688 6953 215 2.196629 4.72275235 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 392 9.83e-105   NTclustered gi|238617602|gb|FJ973377.1| 188950 g6661 i0 99.537 67.5116279069767 216 0 100 1 1 215 2888 2673 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 14515 392 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
16746588 16746588 PRJNA1036688_P_NODE_10054_length_169_cov_2.227273_g9762_i0 PRJNA1036688 10054 169 2.227273 3.76409137 Acanthoceras zachariasii 451788 SAR_Eukaryotes SAR_Eukaryotes 95.3 2.31e-15   NTclustered gi|1418588907|ref|NC_038009.1| 451788 g9762 i0 91.304 56 69 6 41 0 1 69 71403 71471 Acanthoceras zachariasii chloroplast, complete genome blastn 9464 95.3 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Acanthocerataceae Acanthoceras Acanthoceras zachariasii
16746614 16746614 PRJNA1036688_P_NODE_12294_length_150_cov_1.362832_g12002_i0 PRJNA1036688 12294 150 1.362832 2.044248 Sterkiella histriomuscorum 94289 SAR_Eukaryotes SAR_Eukaryotes 128 1.97e-25   NTclustered gi|47176397|gb|AY617977.1| 94289 g12002 i0 87.5 6.81333333333333 112 12 74 2 32 142 455 345 Sterkiella histriomuscorum clone UGC1O0006_M16_R genomic sequence blastn 1022 128 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Sterkiella Sterkiella histriomuscorum
18021508 18021508 PRJNA1036688_P_NODE_11455_length_156_cov_2.588235_g11163_i0 PRJNA1036688 11455 156 2.588235 4.0376466 Tribonema sp. 2679974 SAR_Eukaryotes SAR_Eukaryotes 202 1.21e-47   NTclustered gi|2518133535|gb|OQ243223.1| 2679974 g11163 i0 93.382 3.25 136 9 87 0 3 138 6164 6029 Tribonema sp. strain GXU-A10 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, and 28S-18S ribosomal RNA intergenic spacer, complete sequence blastn 507 202 1 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema sp.
18021538 18021538 PRJNA1036688_P_NODE_5315_length_262_cov_2.640000_g5023_i0 PRJNA1036688 5315 262 2.64 6.9168 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 484 1.99e-132   NTclustered gi|325194423|emb|FR825253.1| 890382 g5023 i0 100 101.465648854962 262 0 100 0 1 262 450 711 Albugo laibachii Nc14, genomic contig CONTIG_1950_NC14_v4_1284_22758 blastn 26584 484 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
20570867 20570867 PRJNA1036688_P_NODE_9137_length_179_cov_3.352113_g8845_i0 PRJNA1036688 9137 179 3.352113 6.00028227 Parabistichella variabilis 1071703 SAR_Eukaryotes SAR_Eukaryotes 324 2.91e-84   NTclustered gi|751363249|gb|KP266659.1| 1071703 g8845 i0 99.438 99.195530726257 178 1 99 0 1 178 1528 1705 Parabistichella variabilis isolate B102 28S ribosomal RNA gene, partial sequence blastn 17756 324 1 Eukaryota Sar   Ciliophora Spirotrichea     Parabistichella Parabistichella variabilis
21846639 21846639 PRJNA1036688_P_NODE_9638_length_174_cov_1.386861_g9346_i0 PRJNA1036688 9638 174 1.386861 2.41313814 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 316 4.7e-82   NTclustered gi|325194423|emb|FR825253.1| 890382 g9346 i0 99.425 100 174 1 100 0 1 174 699 872 Albugo laibachii Nc14, genomic contig CONTIG_1950_NC14_v4_1284_22758 blastn 17400 316 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
23960414 23960414 PRJNA1036688_P_NODE_10959_length_161_cov_1.217742_g10667_i0 PRJNA1036688 10959 161 1.217742 1.96056462 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 298 1.56e-76   NTclustered gi|88660256|gb|DQ388543.1| 373003 g10667 i0 100 98.888198757764 161 0 100 0 1 161 691 531 Spumella-like flagellate 8b3 18S ribosomal RNA gene, partial sequence blastn 15921 298 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae   Spumella-like flagellate 8b3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;