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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA1035005" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1035005 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
168613 168613 PRJNA1035005_P_NODE_11001_length_354_cov_0.854093_g10596_i0 PRJNA1035005 11001 354 0.854093 3.02348922 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.009   NTclustered gi|2912986657|dbj|AP039591.1| 145626 g10596 i0 96.875 0.0903954802259887 32 1 9 0 303 334 46846062 46846093 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 10, sequence blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
2283098 2283098 PRJNA1035005_P_NODE_52022_length_254_cov_1.906077_g51616_i0 PRJNA1035005 52022 254 1.906077 4.84143558 root 1 Root_unresolved Root_unresolved 52.8 0.023   NTclustered gi|2693996071|ref|XM_063564943.1| 6551 g51616 i0 100 0.34251968503937 28 0 11 0 119 146 1100 1073 PREDICTED: Mytilus trossulus fibroin heavy chain-like (LOC134706208), mRNA blastn 87 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus
3995208 3995208 PRJNA1035005_P_NODE_1724_length_934_cov_1.439024_g1390_i0 PRJNA1035005 1724 934 1.439024 13.44048416 Lottia gigantea 225164 Mollusca Mollusca 63.9 4.36e-5   NTclustered gi|676435232|ref|XM_009049242.1| 225164 g1390 i0 95 2.88115631691649 40 2 4 0 700 739 2837 2876 Lottia gigantea hypothetical protein partial mRNA blastn 2691 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
6547222 6547222 PRJNA1035005_P_NODE_79566_length_244_cov_0.912281_g79160_i0 PRJNA1035005 79566 244 0.912281 2.22596564 Mercenaria mercenaria 6596 Mollusca Mollusca 52.8 0.022   NTclustered gi|2442065115|ref|XM_053544833.1| 6596 g79160 i0 100 0.114754098360656 28 0 11 0 193 220 1139 1166 PREDICTED: Mercenaria mercenaria leucine-rich repeat-containing protein 74A-like (LOC128557454), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
14197481 14197481 PRJNA1035005_P_NODE_3812_length_550_cov_6.823899_g3414_i0 PRJNA1035005 3812 550 6.823899 37.5314445 Bradybaena similaris 145626 Mollusca Mollusca 60.2 3.23e-4   NTclustered gi|2912999747|dbj|AP039606.1| 145626 g3414 i0 100 15.7909090909091 32 0 6 0 19 50 13777258 13777289 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 25, sequence blastn 8685 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
15471720 15471720 PRJNA1035005_P_NODE_43853_length_264_cov_2.345550_g43447_i0 PRJNA1035005 43853 264 2.34555 6.192252 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.024   NTclustered gi|2912990805|dbj|AP039595.1| 145626 g43447 i0 96.875 0.121212121212121 32 0 12 1 177 208 20519492 20519462 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 14, sequence blastn 32 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
18020481 18020481 PRJNA1035005_P_NODE_11335_length_351_cov_0.841727_g10930_i0 PRJNA1035005 11335 351 0.841727 2.95446177 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.003   NTclustered gi|2912993551|dbj|AP039598.1| 145626 g10930 i0 89.13 1.76638176638177 46 3 13 2 150 194 55614944 55614900 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 17, sequence blastn 620 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
20570271 20570271 PRJNA1035005_P_NODE_74837_length_246_cov_0.901734_g74431_i0 PRJNA1035005 74837 246 0.901734 2.21826564 Bradybaena similaris 145626 Mollusca Mollusca 62.1 3.69e-5   NTclustered gi|2912984370|dbj|AP039589.1| 145626 g74431 i0 100 2.84146341463415 33 0 13 0 1 33 25082303 25082271 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 8, sequence blastn 699 62.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
24395065 24395065 PRJNA1035005_P_NODE_62740_length_250_cov_0.881356_g62334_i0 PRJNA1035005 62740 250 0.881356 2.20339 Bradybaena similaris 145626 Mollusca Mollusca 67.6 8.09e-7   NTclustered gi|2912989933|dbj|AP039594.1| 145626 g62334 i0 83.562 0.624 73 10 28 2 134 204 26595171 26595243 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 13, sequence blastn 156 67.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;