RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1035005" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1035005 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6546980 6546980 PRJNA1035005_P_NODE_50526_length_256_cov_1.704918_g50120_i0 PRJNA1035005 50526 256 1.704918 4.36459008 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 89.8 1.77e-13   NTclustered gi|2202673052|ref|XM_047008110.1| 2897299 g50120 i0 87.179 5.57421875 78 10 30 0 26 103 281 204 PREDICTED: Xenia sp. Carnegie-2017 protein arginine N-methyltransferase 1-like (LOC124457982), mRNA blastn 1427 89.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
16745770 16745770 PRJNA1035005_P_NODE_32574_length_279_cov_1.514563_g32168_i0 PRJNA1035005 32574 279 1.514563 4.22563077 Acropora digitifera 70779 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|1005496559|ref|XM_015895384.1| 70779 g32168 i0 94.444 0.387096774193548 36 2 13 0 143 178 1065 1100 PREDICTED: Acropora digitifera uncharacterized LOC107330829 (LOC107330829), transcript variant X1, mRNA blastn 108 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora digitifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;