contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA1035005" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6546887 | 6546887 | PRJNA1035005_P_NODE_37586_length_272_cov_3.914573_g37180_i0 | PRJNA1035005 | 37586 | 272 | 3.914573 | 10.64763856 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 278 | 3.78e-70 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g37180 | i0 | 88.136 | 396.191176470588 | 236 | 25 | 86 | 3 | 37 | 271 | 2001871 | 2001638 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 107764 | 278 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 7821459 | 7821459 | PRJNA1035005_P_NODE_41787_length_267_cov_1.608247_g41381_i0 | PRJNA1035005 | 41787 | 267 | 1.608247 | 4.29401949 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 183 | 8.3e-42 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g41381 | i0 | 82.326 | 20.1535580524345 | 215 | 34 | 80 | 4 | 37 | 249 | 3957034 | 3956822 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 5381 | 183 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 15471546 | 15471546 | PRJNA1035005_P_NODE_19553_length_301_cov_3.754386_g19147_i0 | PRJNA1035005 | 19553 | 301 | 3.754386 | 11.30070186 | Limnoglobus roseus | 2598579 | Bacteria | Bacteria | 427 | 3.9799999999999998e-115 | NTclustered | gi|1733446852|gb|CP042425.1| | 2598579 | g19147 | i0 | 92.359 | 98.6976744186046 | 301 | 21 | 100 | 1 | 1 | 301 | 2955179 | 2955477 | Limnoglobus roseus strain PX52 chromosome, complete genome | blastn | 29708 | 427 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Limnoglobus | Limnoglobus roseus | |
| 16745724 | 16745724 | PRJNA1035005_P_NODE_26174_length_287_cov_2.602804_g25768_i0 | PRJNA1035005 | 26174 | 287 | 2.602804 | 7.47004748 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 374 | 4.989999999999998e-99 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g25768 | i0 | 90.311 | 163.766550522648 | 289 | 23 | 100 | 5 | 1 | 287 | 2002190 | 2001905 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 47001 | 374 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 18020673 | 18020673 | PRJNA1035005_P_NODE_3455_length_584_cov_1.810176_g3062_i0 | PRJNA1035005 | 3455 | 584 | 1.810176 | 10.57142784 | uncultured Planctomycetota bacterium | 120965 | Bacteria | Bacteria | 922 | 0 | NTclustered | gi|576901573|gb|KF827166.1| | 120965 | g3062 | i0 | 96.441 | 92.9897260273973 | 562 | 14 | 96 | 4 | 1 | 562 | 556 | 1 | Uncultured planctomycete clone C-30-34 16S ribosomal RNA gene, partial sequence | blastn | 54306 | 922 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | uncultured Planctomycetota bacterium | |||||
| 19294872 | 19294872 | PRJNA1035005_P_NODE_71916_length_247_cov_0.896552_g71510_i0 | PRJNA1035005 | 71916 | 247 | 0.896552 | 2.21448344 | Planctomycetes bacterium K2D | 2528022 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|1712768844|gb|CP036350.1| | 2527962 | g71510 | i0 | 100 | 28.7854251012146 | 247 | 0 | 100 | 0 | 1 | 247 | 4246591 | 4246837 | Planctomycetes bacterium K2D chromosome, complete genome | blastn | 7110 | 457 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetes bacterium K2D | |||||
| 20570098 | 20570098 | PRJNA1035005_P_NODE_53097_length_253_cov_1.688889_g52691_i0 | PRJNA1035005 | 53097 | 253 | 1.688889 | 4.27288917 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 383 | 7.17e-102 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g52691 | i0 | 94.715 | 99.296442687747 | 246 | 13 | 97 | 0 | 1 | 246 | 5154269 | 5154514 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 25122 | 383 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 24394700 | 24394700 | PRJNA1035005_P_NODE_11400_length_350_cov_1.321300_g10995_i0 | PRJNA1035005 | 11400 | 350 | 1.3213 | 4.62455 | uncultured Opitutia bacterium | 575426 | Bacteria | Bacteria | 625 | 1.5499999999999995e-174 | NTclustered | gi|523452328|gb|KF182748.1| | 575426 | g10995 | i0 | 98.857 | 99.8314285714286 | 350 | 4 | 100 | 0 | 1 | 350 | 481 | 830 | Uncultured Opitutae bacterium clone S1-003 16S ribosomal RNA gene, partial sequence | blastn | 34941 | 625 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | uncultured Opitutia bacterium | ||||
| 24395061 | 24395061 | PRJNA1035005_P_NODE_62200_length_250_cov_0.881356_g61794_i0 | PRJNA1035005 | 62200 | 250 | 0.881356 | 2.20339 | Prosthecobacter fusiformis | 48464 | Bacteria | Bacteria | 446 | 8.89e-121 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g61794 | i0 | 98.8 | 45.784 | 250 | 3 | 100 | 0 | 1 | 250 | 1361 | 1610 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 11446 | 446 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;