RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1032461" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1032461 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6110366 6110366 PRJNA1032461_S_NODE_22205_length_155_cov_3.679245_g22107_i0 PRJNA1032461 22205 155 3.679245 5.70282975 Fungi 4751 Fungi Fungi 287 3.21e-73   NTclustered gi|1768664880|emb|LR730779.1| 4876 g22107 i0 100 100 155 0 100 0 1 155 226 72 Rhizophagus intraradices 28S large subunit ribosomal RNA gene, partial sequence, isolate 067_A06_134 blastn 15500 287 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus intraradices
6545153 6545153 PRJNA1032461_S_NODE_3086_length_318_cov_11.018587_g2988_i0 PRJNA1032461 3086 318 11.018587 35.03910666 uncultured Glomeromycotina 241622 Fungi Fungi 538 1.8799999999999993e-148   NTclustered gi|2415611660|gb|MZ480191.1| 241622 g2988 i0 97.17 104.100628930818 318 9 100 0 1 318 129 446 Uncultured Glomeromycotina clone CHTACBSHOTU0441 small subunit ribosomal RNA gene, partial sequence blastn 33104 538 1 Eukaryota Opisthokonta Fungi Mucoromycota         uncultured Glomeromycotina
10370282 10370282 PRJNA1032461_S_NODE_14449_length_169_cov_0.866667_g14351_i0 PRJNA1032461 14449 169 0.866667 1.46466723 Mucor velutinosus 708070 Fungi Fungi 126 8.2e-25   NTclustered gi|2724932641|ref|XM_064824717.1| 708070 g14351 i0 80.606 53.5443786982249 165 30 97 2 6 169 295 132 Mucor velutinosus uncharacterized protein (ATC70_005429), partial mRNA blastn 9049 126 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;