RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1032461" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA1032461 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18018950 18018950 PRJNA1032461_S_NODE_9535_length_198_cov_6.013423_g9437_i0 PRJNA1032461 9535 198 6.013423 11.90657754 Parapoxvirus orf 3431389 Viruses Viruses 60.2 1.03e-4   NTclustered gi|2755084441|gb|PP943425.1| 10258 g9437 i0 100 18.1565656565657 32 0 16 0 1 32 67797 67828 Orf virus isolate FX10, partial genome blastn 3595 60.2 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf
19292912 19292912 PRJNA1032461_S_NODE_2096_length_372_cov_473.281734_g1998_i0 PRJNA1032461 2096 372 473.281734 1760.60805048 Parapoxvirus orf 3431389 Viruses Viruses 145 5.67e-30   NTclustered gi|2755084441|gb|PP943425.1| 10258 g1998 i0 95.652 44.7338709677419 92 0 49 3 1 90 67736 67825 Orf virus isolate FX10, partial genome blastn 16641 145 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf
21843958 21843958 PRJNA1032461_S_NODE_3918_length_287_cov_319.521008_g3820_i0 PRJNA1032461 3918 287 319.521008 917.02529296 Parapoxvirus orf 3431389 Viruses Viruses 145 4.26e-30   NTclustered gi|2755084441|gb|PP943425.1| 10258 g3820 i0 95.652 29.3379790940767 92 0 32 3 1 90 67736 67825 Orf virus isolate FX10, partial genome blastn 8420 145 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;