contig_metadata
20 rows where analysis = "blastn", bioproject = "PRJNA1031674" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2282011 | 2282011 | PRJNA1031674_P_NODE_20522_length_257_cov_1.304348_g20311_i0 | PRJNA1031674 | 20522 | 257 | 1.304348 | 3.35217436 | Anaeromyxobacter | 161492 | Bacteria | Bacteria | 446 | 9.179999999999998e-121 | NTclustered | gi|470482295|ref|NR_076524.1| | 404589 | g20311 | i0 | 98.054 | 34.6692607003891 | 257 | 4 | 100 | 1 | 1 | 257 | 851 | 596 | Anaeromyxobacter sp. Fw109-5 strain Fw109-5 23S ribosomal RNA, complete sequence | blastn | 8910 | 446 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter sp. Fw109-5 | ||
| 2716984 | 2716984 | PRJNA1031674_P_NODE_11023_length_290_cov_1.170507_g10812_i0 | PRJNA1031674 | 11023 | 290 | 1.170507 | 3.3944703 | Corallococcus sp. EGB | 1521117 | Bacteria | Bacteria | 392 | 1.39e-104 | NTclustered | gi|2094564806|gb|CP079946.1| | 1521117 | g10812 | i0 | 91.034 | 1.98965517241379 | 290 | 26 | 100 | 0 | 1 | 290 | 2305686 | 2305975 | Corallococcus sp. EGB chromosome, complete genome | blastn | 577 | 392 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus sp. EGB | ||
| 3993054 | 3993054 | PRJNA1031674_P_NODE_10544_length_292_cov_1.808219_g10333_i0 | PRJNA1031674 | 10544 | 292 | 1.808219 | 5.27999948 | Anaeromyxobacter oryzae | 2918170 | Bacteria | Bacteria | 132 | 3.38e-26 | NTclustered | gi|2199265233|dbj|AP025591.1| | 2918170 | g10333 | i0 | 79.891 | 4.47945205479452 | 184 | 33 | 62 | 4 | 2 | 183 | 3467052 | 3467233 | Anaeromyxobacter oryzae DNA, complete genome | blastn | 1308 | 132 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter oryzae | ||
| 4834784 | 4834784 | PRJNA1031674_P_NODE_11124_length_289_cov_2.101852_g10913_i0 | PRJNA1031674 | 11124 | 289 | 2.101852 | 6.07435228 | Myxococcus | 32 | Bacteria | Bacteria | 189 | 1.95e-43 | NTclustered | gi|2869653495|gb|CP175551.1| | 33 | g10913 | i0 | 79.286 | 2.90657439446367 | 280 | 50 | 96 | 8 | 9 | 284 | 9407538 | 9407263 | Myxococcus fulvus strain KYC1117 chromosome, complete genome | blastn | 840 | 189 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus fulvus | ||
| 6544980 | 6544980 | PRJNA1031674_P_NODE_8706_length_310_cov_2.485232_g8495_i0 | PRJNA1031674 | 8706 | 310 | 2.485232 | 7.7042192 | Melittangium boletus | 83453 | Bacteria | Bacteria | 62.1 | 4.81e-5 | NTclustered | gi|1243026503|gb|CP022163.1| | 1294270 | g8495 | i0 | 76.471 | 0.538709677419355 | 136 | 18 | 39 | 11 | 3 | 124 | 7136429 | 7136564 | Melittangium boletus DSM 14713 chromosome, complete genome | blastn | 167 | 62.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Melittangium | Melittangium boletus | ||
| 7819247 | 7819247 | PRJNA1031674_P_NODE_14347_length_279_cov_1.888350_g14136_i0 | PRJNA1031674 | 14347 | 279 | 1.88835 | 5.2684965 | Minicystis rosea | 888845 | Bacteria | Bacteria | 239 | 1.84e-58 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g14136 | i0 | 82.624 | 24.1111111111111 | 282 | 37 | 100 | 9 | 1 | 276 | 2525749 | 2526024 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 6727 | 239 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 7819434 | 7819434 | PRJNA1031674_P_NODE_25947_length_244_cov_1.959064_g25736_i0 | PRJNA1031674 | 25947 | 244 | 1.959064 | 4.78011616 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 246 | 9.409999999999999e-61 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g25736 | i0 | 85.425 | 287.385245901639 | 247 | 24 | 99 | 10 | 4 | 244 | 3942197 | 3941957 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 70122 | 246 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 8660012 | 8660012 | PRJNA1031674_P_NODE_25347_length_245_cov_2.186047_g25136_i0 | PRJNA1031674 | 25347 | 245 | 2.186047 | 5.35581515 | Myxococcaceae | 31 | Bacteria | Bacteria | 355 | 1.51e-93 | NTclustered | gi|2722781719|gb|CP102770.1| | 83455 | g25136 | i0 | 93.333 | 2.95918367346939 | 240 | 16 | 98 | 0 | 1 | 240 | 1998838 | 1998599 | Myxococcus stipitatus strain YRE12 chromosome, complete genome | blastn | 725 | 355 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus stipitatus | ||
| 9094428 | 9094428 | PRJNA1031674_P_NODE_648_length_894_cov_1.440926_g485_i0 | PRJNA1031674 | 648 | 894 | 1.440926 | 12.88187844 | Pyxidicoccus parkwayensis | 2813578 | Bacteria | Bacteria | 1458 | 0 | NTclustered | gi|1998505907|gb|CP071090.1| | 2813578 | g485 | i0 | 96.085 | 339.887024608501 | 894 | 35 | 100 | 0 | 1 | 894 | 2161810 | 2160917 | Pyxidicoccus parkwaysis strain SCPEA02 chromosome | blastn | 303859 | 1458 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pyxidicoccus | Pyxidicoccus parkwayensis | ||
| 9934854 | 9934854 | PRJNA1031674_P_NODE_14488_length_279_cov_1.291262_g14277_i0 | PRJNA1031674 | 14488 | 279 | 1.291262 | 3.60262098 | Corallococcus | 83461 | Bacteria | Bacteria | 143 | 1.48e-29 | NTclustered | gi|337255776|gb|CP002830.1| | 35 | g14277 | i0 | 86.364 | 1.38351254480287 | 132 | 17 | 47 | 1 | 124 | 255 | 7745644 | 7745514 | Myxococcus macrosporus strain HW-1, complete genome | blastn | 386 | 143 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus macrosporus | ||
| 10369753 | 10369753 | PRJNA1031674_P_NODE_10669_length_291_cov_2.045872_g10458_i0 | PRJNA1031674 | 10669 | 291 | 2.045872 | 5.95348752 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 398 | 3.0099999999999996e-106 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g10458 | i0 | 91.409 | 229.73883161512 | 291 | 23 | 99 | 2 | 1 | 290 | 9678408 | 9678697 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 66854 | 398 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 10369883 | 10369883 | PRJNA1031674_P_NODE_18129_length_266_cov_1.549223_g17918_i0 | PRJNA1031674 | 18129 | 266 | 1.549223 | 4.12093318 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 374 | 4.569999999999999e-99 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g17918 | i0 | 92.72 | 44.4285714285714 | 261 | 15 | 97 | 3 | 8 | 266 | 678193 | 677935 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 11818 | 374 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 11645105 | 11645105 | PRJNA1031674_P_NODE_10010_length_296_cov_3.511211_g9799_i0 | PRJNA1031674 | 10010 | 296 | 3.511211 | 10.39318456 | Archangium violaceum | 83451 | Bacteria | Bacteria | 145 | 4.41e-30 | NTclustered | gi|1985695619|gb|CP069396.1| | 83451 | g9799 | i0 | 84.354 | 4.75675675675676 | 147 | 23 | 50 | 0 | 150 | 296 | 1679308 | 1679454 | Archangium violaceum strain SDU8 chromosome, complete genome | blastn | 1408 | 145 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 14195397 | 14195397 | PRJNA1031674_P_NODE_27712_length_241_cov_1.767857_g27501_i0 | PRJNA1031674 | 27712 | 241 | 1.767857 | 4.26053537 | Minicystis rosea | 888845 | Bacteria | Bacteria | 106 | 1.64e-18 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g27501 | i0 | 80.851 | 1.6804979253112 | 141 | 21 | 57 | 5 | 3 | 140 | 4363092 | 4363229 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 405 | 106 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 15469585 | 15469585 | PRJNA1031674_P_NODE_24653_length_247_cov_0.885057_g24442_i0 | PRJNA1031674 | 24653 | 247 | 0.885057 | 2.18609079 | Myxococcus sp. MH1 | 2982796 | Bacteria | Bacteria | 418 | 1.9099999999999998e-112 | NTclustered | gi|2321229309|dbj|AP026947.1| | 2982796 | g24442 | i0 | 97.166 | 4.00404858299595 | 247 | 7 | 100 | 0 | 1 | 247 | 4392799 | 4392553 | Myxococcus sp. MH1 DNA, complete genome | blastn | 989 | 418 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus sp. MH1 | ||
| 16743572 | 16743572 | PRJNA1031674_P_NODE_17154_length_270_cov_1.167513_g16943_i0 | PRJNA1031674 | 17154 | 270 | 1.167513 | 3.1522851 | Corallococcus exercitus | 2316736 | Bacteria | Bacteria | 399 | 7.669999999999998e-107 | NTclustered | gi|2809270164|gb|CP102577.1| | 2316736 | g16943 | i0 | 93.333 | 2.98518518518519 | 270 | 18 | 100 | 0 | 1 | 270 | 9159341 | 9159072 | Corallococcus exercitus strain SDU142 chromosome, complete genome | blastn | 806 | 399 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus exercitus | ||
| 18018488 | 18018488 | PRJNA1031674_P_NODE_17415_length_269_cov_1.306122_g17204_i0 | PRJNA1031674 | 17415 | 269 | 1.306122 | 3.51346818 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 171 | 6.52e-38 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g17204 | i0 | 78.439 | 1 | 269 | 52 | 99 | 6 | 4 | 269 | 189044 | 188779 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 269 | 171 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 18018613 | 18018613 | PRJNA1031674_P_NODE_2695_length_473_cov_1.420000_g2485_i0 | PRJNA1031674 | 2695 | 473 | 1.42 | 6.7166 | Pyxidicoccus parkwayensis | 2813578 | Bacteria | Bacteria | 761 | 0 | NTclustered | gi|1998505907|gb|CP071090.1| | 2813578 | g2485 | i0 | 95.772 | 271.583509513742 | 473 | 19 | 100 | 1 | 1 | 473 | 2161042 | 2160571 | Pyxidicoccus parkwaysis strain SCPEA02 chromosome | blastn | 128459 | 761 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pyxidicoccus | Pyxidicoccus parkwayensis | ||
| 20133282 | 20133282 | PRJNA1031674_P_NODE_28856_length_230_cov_2.121019_g28645_i0 | PRJNA1031674 | 28856 | 230 | 2.121019 | 4.8783437 | Archangium | 47 | Bacteria | Bacteria | 364 | 2.319999999999999e-96 | NTclustered | gi|2579687829|gb|CP043494.1| | 83450 | g28645 | i0 | 95.217 | 250.878260869565 | 230 | 11 | 100 | 0 | 1 | 230 | 5101085 | 5100856 | Archangium minus strain Cbm 6 chromosome, complete genome | blastn | 57702 | 364 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium minus | ||
| 23119002 | 23119002 | PRJNA1031674_P_NODE_24979_length_246_cov_0.890173_g24768_i0 | PRJNA1031674 | 24979 | 246 | 0.890173 | 2.18982558 | Corallococcus coralloides | 184914 | Bacteria | Bacteria | 433 | 6.79e-117 | NTclustered | gi|1561763003|gb|CP034669.1| | 184914 | g24768 | i0 | 98.374 | 1.93089430894309 | 246 | 4 | 100 | 0 | 1 | 246 | 6308404 | 6308159 | Corallococcus coralloides strain B035 chromosome, complete genome | blastn | 475 | 433 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus coralloides |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;