RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1031674" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 8 ✖

bioproject 1

  • PRJNA1031674 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
166865 166865 PRJNA1031674_P_NODE_6521_length_341_cov_3.869403_g6310_i0 PRJNA1031674 6521 341 3.869403 13.19466423 Chronacard virus 3129783 Viruses Viruses 420 7.67e-113   NTclustered gi|2717318323|gb|PP172180.1| 3129783 g6310 i0 96.825 253.513196480938 252 6 74 2 1 251 251 1 MAG: Chronacard virus isolate CN1A_k141_43539 genomic sequence blastn 86448 420 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Chronacard virus
3993047 3993047 PRJNA1031674_P_NODE_1004_length_720_cov_1.183926_g809_i0 PRJNA1031674 1004 720 1.183926 8.5242672 Skokie dicistro-like virus 2789443 Viruses Viruses 1280 0   NTclustered gi|2806502719|gb|PQ054859.1| 2789443 g809 i0 98.75 2.78055555555556 720 9 100 0 1 720 3358 4077 MAG: Skokie dicistro-like virus isolate QJ5MS4721 genomic sequence blastn 2002 1280 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
3993175 3993175 PRJNA1031674_P_NODE_17864_length_267_cov_1.587629_g17653_i0 PRJNA1031674 17864 267 1.587629 4.23896943 Crinivirus flavisolani 3428113 Viruses Viruses 62.1 4.06e-5   NTclustered gi|375127651|gb|JN701960.1| 103881 g17653 i0 100 3.21348314606742 33 0 12 0 77 109 379 411 Potato yellow vein virus isolate 716 Ipiales heat shock protein gene, complete cds blastn 858 62.1 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Crinivirus Crinivirus flavisolani
9094118 9094118 PRJNA1031674_P_NODE_12448_length_285_cov_1.702830_g12237_i0 PRJNA1031674 12448 285 1.70283 4.8530655 Skokie dicistro-like virus 2789443 Viruses Viruses 518 2.16e-142   NTclustered gi|2806502719|gb|PQ054859.1| 2789443 g12237 i0 99.647 1.9859649122807 283 1 99 0 3 285 4385 4103 MAG: Skokie dicistro-like virus isolate QJ5MS4721 genomic sequence blastn 566 518 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
10369951 10369951 PRJNA1031674_P_NODE_22249_length_251_cov_0.865169_g22038_i0 PRJNA1031674 22249 251 0.865169 2.17157419 Sobemovirus RGMOV 3432504 Viruses Viruses 448 2.48e-121   NTclustered gi|2129881132|gb|OK424596.1| 119910 g22038 i0 98.805 10.804780876494 251 3 100 0 1 251 3550 3300 Ryegrass mottle virus isolate RMV/Seattle/USA/2021, complete genome blastn 2712 448 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus RGMOV
12920266 12920266 PRJNA1031674_P_NODE_10151_length_295_cov_2.450450_g9940_i0 PRJNA1031674 10151 295 2.45045 7.2288275 Skokie dicistro-like virus 2789443 Viruses Viruses 518 2.25e-142   NTclustered gi|2806502719|gb|PQ054859.1| 2789443 g9940 i0 98.305 7.18983050847458 295 5 100 0 1 295 1660 1954 MAG: Skokie dicistro-like virus isolate QJ5MS4721 genomic sequence blastn 2121 518 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
12920387 12920387 PRJNA1031674_P_NODE_17511_length_268_cov_2.194872_g17300_i0 PRJNA1031674 17511 268 2.194872 5.88225696 Bromovirus BMV 3427622 Viruses Viruses 484 2.0399999999999996e-132   NTclustered gi|2329659857|gb|OK558642.1| 12302 g17300 i0 99.257 33.910447761194 269 1 100 1 1 268 1671 1939 Brome mosaic virus isolate VRS-315 hypothetical protein gene, complete cds blastn 9088 484 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Bromovirus Bromovirus BMV
15469465 15469465 PRJNA1031674_P_NODE_17253_length_269_cov_2.117347_g17042_i0 PRJNA1031674 17253 269 2.117347 5.69566343 Johnsongrass virus 2845206 Viruses Viruses 497 2.63e-136   NTclustered gi|2052625483|gb|MW756210.1| 2845206 g17042 i0 100 7 269 0 100 0 1 269 1928 2196 Johnsongrass virus isolate JVG-1 polyprotein gene, complete cds blastn 1883 497 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae   Johnsongrass virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;