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contig_metadata

27 rows where analysis = "blastn", bioproject = "PRJNA1031674" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 27 ✖

bioproject 1

  • PRJNA1031674 · 27 ✖

analysis 1

  • blastn · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1441311 1441311 PRJNA1031674_P_NODE_12562_length_285_cov_1.334906_g12351_i0 PRJNA1031674 12562 285 1.334906 3.8044821 Chlamydomonas reinhardtii 3055 Plants Plants 492 1.31e-134   NTclustered gi|2082264800|ref|XM_043070043.1| 3055 g12351 i0 98.561 0.975438596491228 278 4 98 0 1 278 550 273 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_14g613550v5), mRNA blastn 278 492 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
1441545 1441545 PRJNA1031674_P_NODE_28042_length_241_cov_0.916667_g27831_i0 PRJNA1031674 28042 241 0.916667 2.20916747 Chlorosarcinopsis eremi 332213 Plants Plants 80.5 9.95e-11   NTclustered gi|1642525901|ref|NC_042250.1| 332213 g27831 i0 80.645 4.17427385892116 124 7 76 8 121 241 99979 100088 Chlorosarcinopsis eremi culture UTEX:1186 chloroplast, complete genome blastn 1006 80.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlorosarcinales Chlorosarcinaceae Chlorosarcinopsis Chlorosarcinopsis eremi
2717194 2717194 PRJNA1031674_P_NODE_22803_length_250_cov_0.870056_g22592_i0 PRJNA1031674 22803 250 0.870056 2.17514 Phyllosiphon coccidium 1837062 Plants Plants 451 1.91e-122   NTclustered gi|2473928268|ref|NC_072900.1| 1837062 g22592 i0 99.2 88.576 250 2 100 0 1 250 109417 109168 Phyllosiphon coccidium clone S213 chloroplast, complete genome blastn 22144 451 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Phyllosiphon Phyllosiphon coccidium
5269644 5269644 PRJNA1031674_P_NODE_25825_length_245_cov_0.895349_g25614_i0 PRJNA1031674 25825 245 0.895349 2.19360505 Chlamydomonas reinhardtii 3055 Plants Plants 453 5.1900000000000006e-123   NTclustered gi|2082261585|ref|XM_043068686.1| 3055 g25614 i0 100 1.48571428571429 245 0 100 0 1 245 984 740 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g537800v5), mRNA blastn 364 453 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
9094402 9094402 PRJNA1031674_P_NODE_4808_length_381_cov_1.863636_g4598_i0 PRJNA1031674 4808 381 1.863636 7.10045316 Stichococcus bacillaris 37433 Plants Plants 407 6.729999999999999e-109   NTclustered gi|371782093|emb|HE610125.1| 37433 g4598 i0 86.234 101.472440944882 385 42 100 8 1 381 4696 4319 Stichococcus bacillaris 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain SAG 379-2 blastn 38661 407 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Stichococcaceae Stichococcus Stichococcus bacillaris
9094437 9094437 PRJNA1031674_P_NODE_7188_length_328_cov_3.047059_g6977_i0 PRJNA1031674 7188 328 3.047059 9.99435352 Chlorococcum sp. KSF0227 2978530 Plants Plants 510 4.24e-140   NTclustered gi|2441075444|gb|OP448669.1| 2978530 g6977 i0 94.801 112.301829268293 327 17 99 0 1 327 131775 131449 Chlorococcum sp. KSF0227 chloroplast, complete genome blastn 36835 510 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlorococcaceae Chlorococcum Chlorococcum sp. KSF0227
10369786 10369786 PRJNA1031674_P_NODE_12549_length_285_cov_1.367925_g12338_i0 PRJNA1031674 12549 285 1.367925 3.89858625 Chloroidium sp. KL-2023a 3031248 Plants Plants 490 4.71e-134   NTclustered gi|2450595352|gb|ON986219.1| 3031248 g12338 i0 97.88 108.926315789474 283 6 99 0 1 283 220370 220652 Chloroidium sp. KL-2023a clone 2023 chloroplast, complete genome blastn 31044 490 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium sp. KL-2023a
10369966 10369966 PRJNA1031674_P_NODE_23749_length_248_cov_1.291429_g23538_i0 PRJNA1031674 23749 248 1.291429 3.20274392 Chlamydomonas reinhardtii 3055 Plants Plants 459 1.13e-124   NTclustered gi|2082244992|ref|XM_001692235.2| 3055 g23538 i0 100 1 248 0 100 0 1 248 4058 3811 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_04g222700v5), mRNA blastn 248 459 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
10370145 10370145 PRJNA1031674_P_NODE_9089_length_306_cov_1.064378_g8878_i0 PRJNA1031674 9089 306 1.064378 3.25699668 Chlorosarcinopsis eremi 332213 Plants Plants 484 2.3699999999999996e-132   NTclustered gi|1610617827|ref|NC_041430.1| 332213 g8878 i0 95.13 1.00653594771242 308 13 100 1 1 306 9652 9345 Chlorosarcinopsis eremi strain MKA.28 mitochondrion, complete genome blastn 308 484 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlorosarcinales Chlorosarcinaceae Chlorosarcinopsis Chlorosarcinopsis eremi
11645283 11645283 PRJNA1031674_P_NODE_21750_length_252_cov_1.134078_g21539_i0 PRJNA1031674 21750 252 1.134078 2.85787656 Chlamydomonas reinhardtii 3055 Plants Plants 466 6.89e-127   NTclustered gi|2082260615|ref|XM_043068304.1| 3055 g21539 i0 100 1 252 0 100 0 1 252 2796 2545 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g516200v5), mRNA blastn 252 466 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
13760149 13760149 PRJNA1031674_P_NODE_18491_length_264_cov_3.753927_g18280_i0 PRJNA1031674 18491 264 3.753927 9.9103672799999991 Chloroidium 1034479 Plants Plants 444 3.41e-120   NTclustered gi|255506502|gb|GQ168949.1| 3082 g18280 i0 96.97 111.776515151515 264 8 100 0 1 264 222 485 Pseudochlorella aquatica strain SAG 2149 D1/32 kD photosystem II reaction center protein (psbA) gene, partial cds; chloroplast blastn 29509 444 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium saccharophilum
15469515 15469515 PRJNA1031674_P_NODE_1993_length_538_cov_3.419355_g1785_i0 PRJNA1031674 1993 538 3.419355 18.3961299 Protosiphon botryoides 44656 Plants Plants 723 0   NTclustered gi|1509778881|gb|MG778491.1| 44656 g1785 i0 90.909 117.355018587361 539 47 100 2 1 538 22595 23132 Protosiphon botryoides RNA polymerase beta subunit protein b (rpoBb), RNA polymerase beta subunit protein a (rpoBa), photosystem II protein VI (psbF), photosystem II protein L (psbL), cytochrome b6/f complex subunit V (petG), ribosomal protein S3 (rps3), RNA polymerase beta'' subunit (rpoC2), and D1 reaction center protein of photosystem II (psbA) genes, complete cds; and photosystem I P700 chlorophyll a apoprotein A1 (psaA) gene, exon 3 and partial cds; chloroplast blastn 63137 723 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Protosiphonaceae Protosiphon Protosiphon botryoides
16743550 16743550 PRJNA1031674_P_NODE_1634_length_583_cov_36.347059_g1427_i0 PRJNA1031674 1634 583 36.347059 211.90335397 Chlorosarcinopsis eremi 332213 Plants Plants 1055 0   NTclustered gi|1642525901|ref|NC_042250.1| 332213 g1427 i0 99.314 94.3310463121784 583 4 100 0 1 583 128871 129453 Chlorosarcinopsis eremi culture UTEX:1186 chloroplast, complete genome blastn 54995 1055 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlorosarcinales Chlorosarcinaceae Chlorosarcinopsis Chlorosarcinopsis eremi
16743669 16743669 PRJNA1031674_P_NODE_23114_length_249_cov_1.375000_g22903_i0 PRJNA1031674 23114 249 1.375 3.42375 Chlamydomonas reinhardtii 3055 Plants Plants 460 3.16e-125   NTclustered gi|2082251207|ref|XM_043064441.1| 3055 g22903 i0 100 4.81124497991968 249 0 100 0 1 249 1221 1469 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_07g345050v5), mRNA blastn 1198 460 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16743677 16743677 PRJNA1031674_P_NODE_23674_length_248_cov_1.680000_g23463_i0 PRJNA1031674 23674 248 1.68 4.1664 Chlorosarcinopsis eremi 332213 Plants Plants 409 1.16e-109   NTclustered gi|1642525901|ref|NC_042250.1| 332213 g23463 i0 96.371 99.258064516129 248 9 100 0 1 248 159507 159754 Chlorosarcinopsis eremi culture UTEX:1186 chloroplast, complete genome blastn 24616 409 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlorosarcinales Chlorosarcinaceae Chlorosarcinopsis Chlorosarcinopsis eremi
18018548 18018548 PRJNA1031674_P_NODE_21135_length_254_cov_1.817680_g20924_i0 PRJNA1031674 21135 254 1.81768 4.6169072 Chlamydomonas reinhardtii 3055 Plants Plants 470 5.37e-128   NTclustered gi|2082244992|ref|XM_001692235.2| 3055 g20924 i0 100 2.53543307086614 254 0 100 0 1 254 1911 2164 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_04g222700v5), mRNA blastn 644 470 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
18018556 18018556 PRJNA1031674_P_NODE_21675_length_252_cov_1.709497_g21464_i0 PRJNA1031674 21675 252 1.709497 4.30793244 Chlamydomonas reinhardtii 3055 Plants Plants 460 3.2e-125   NTclustered gi|2082265174|ref|XM_001689807.2| 3055 g21464 i0 99.605 13.2380952380952 253 0 100 1 1 252 665 413 Chlamydomonas reinhardtii ribosomal protein L5 (CHLRE_14g621450v5), mRNA blastn 3336 460 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
20567662 20567662 PRJNA1031674_P_NODE_10677_length_291_cov_2.000000_g10466_i0 PRJNA1031674 10677 291 2 5.82 Chlamydomonas reinhardtii 3055 Plants Plants 473 4.8599999999999986e-129   NTclustered gi|2082256724|ref|XM_043066733.1| 3055 g10466 i0 95.41 2.09621993127148 305 0 100 1 1 291 3848 4152 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_10g436800v5), mRNA blastn 610 473 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
20567844 20567844 PRJNA1031674_P_NODE_20637_length_256_cov_2.103825_g20426_i0 PRJNA1031674 20637 256 2.103825 5.385792 Nannochloris normandinae 926285 Plants Plants 424 4.28e-114   NTclustered gi|922575245|gb|JQ921007.1| 926285 g20426 i0 96.498 86.4375 257 8 100 1 1 256 1625 1369 Nannochloris normandinae strain SAG 9.82 23S large subunit ribosomal RNA gene, partial sequence; chloroplast blastn 22128 424 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris normandinae
21408972 21408972 PRJNA1031674_P_NODE_4897_length_379_cov_1.241830_g4687_i0 PRJNA1031674 4897 379 1.24183 4.7065357 Trebouxia 13786 Plants Plants 686 0   NTclustered gi|49781197|gb|AY648107.1| 283661 g4687 i0 99.469 100.414248021108 377 2 99 0 3 379 1827 1451 Trebouxia sp. Wei 22-c 26S ribosomal RNA gene, partial sequence blastn 38057 689 0.995645863570392 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. Wei 22-c
21843453 21843453 PRJNA1031674_P_NODE_13678_length_281_cov_1.990385_g13467_i0 PRJNA1031674 13678 281 1.990385 5.59298185 Chlamydomonas reinhardtii 3055 Plants Plants 505 1.65e-138   NTclustered gi|238534971|gb|GQ176394.1| 3055 g13467 i0 99.638 2.85053380782918 276 1 98 0 6 281 3 278 Chlamydomonas reinhardtii clone CNA43 molecular marker mRNA sequence blastn 801 505 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
21843485 21843485 PRJNA1031674_P_NODE_15138_length_276_cov_4.428571_g14927_i0 PRJNA1031674 15138 276 4.428571 12.22285596 Chloroidium sp. KL-2023a 3031248 Plants Plants 488 1.6299999999999995e-133   NTclustered gi|2450595352|gb|ON986219.1| 3031248 g14927 i0 98.551 142.141304347826 276 4 100 0 1 276 219920 220195 Chloroidium sp. KL-2023a clone 2023 chloroplast, complete genome blastn 39231 488 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium sp. KL-2023a
21843785 21843785 PRJNA1031674_P_NODE_7998_length_313_cov_12.170833_g7787_i0 PRJNA1031674 7998 313 12.170833 38.09470729 Chlorosarcinopsis eremi 332213 Plants Plants 558 1.41e-154   NTclustered gi|1642525901|ref|NC_042250.1| 332213 g7787 i0 99.673 122.380191693291 306 0 98 1 1 306 130623 130319 Chlorosarcinopsis eremi culture UTEX:1186 chloroplast, complete genome blastn 38305 558 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlorosarcinales Chlorosarcinaceae Chlorosarcinopsis Chlorosarcinopsis eremi
23118934 23118934 PRJNA1031674_P_NODE_20299_length_257_cov_3.233696_g20088_i0 PRJNA1031674 20299 257 3.233696 8.31059872 Chlorosarcinopsis eremi 332213 Plants Plants 409 1.2e-109   NTclustered gi|1642525901|ref|NC_042250.1| 332213 g20088 i0 99.119 94.284046692607 227 2 100 0 31 257 160389 160163 Chlorosarcinopsis eremi culture UTEX:1186 chloroplast, complete genome blastn 24231 409 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlorosarcinales Chlorosarcinaceae Chlorosarcinopsis Chlorosarcinopsis eremi
23959082 23959082 PRJNA1031674_P_NODE_14239_length_279_cov_3.165049_g14028_i0 PRJNA1031674 14239 279 3.165049 8.83048671 Chlorophyceae 3166 Plants Plants 512 9.81e-141   NTclustered gi|338784396|gb|HQ246433.1| 1050260 g14028 i0 99.642 95.9749103942652 279 1 100 0 1 279 542 264 Chlorosarcinopsis sp. A KF-2011 strain ZA3-2 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 26777 512 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlorosarcinales Chlorosarcinaceae Chlorosarcinopsis Chlorosarcinopsis sp. A KF-2011
24392988 24392988 PRJNA1031674_P_NODE_9520_length_299_cov_3.969027_g9309_i0 PRJNA1031674 9520 299 3.969027 11.86739073 Stichococcus bacillaris 37433 Plants Plants 268 2.54e-67   NTclustered gi|371782093|emb|HE610125.1| 37433 g9309 i0 83.224 83.866220735786 304 40 99 11 1 297 4651 4950 Stichococcus bacillaris 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain SAG 379-2 blastn 25076 268 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Stichococcaceae Stichococcus Stichococcus bacillaris
25233176 25233176 PRJNA1031674_P_NODE_5560_length_361_cov_15.576389_g5350_i0 PRJNA1031674 5560 361 15.576389 56.23076429 Eukaryota 2759 Plants Plants 662 0   NTclustered gi|22535964|gb|AF513371.1| 202784 g5350 i0 99.723 99.6481994459834 361 1 100 0 1 361 1619 1259 Chlorophycean sp. SEV3VF14 18S small subunit ribosomal RNA gene, partial sequence blastn 35973 662 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae       Chlorophyceae sp. SEV3-VF14

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;