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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA1028258" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1028258 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
163184 163184 PRJNA1028258_P_NODE_116981_length_247_cov_0.938202_g116418_i0 PRJNA1028258 116981 247 0.938202 2.31735894 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 407 4.14e-109   NTclustered gi|56757963|gb|AY815390.1| 6182 g116418 i0 96.371 127.060728744939 248 7 100 2 1 247 2229 1983 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 31384 407 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
1438542 1438542 PRJNA1028258_P_NODE_151342_length_231_cov_0.876543_g150779_i0 PRJNA1028258 151342 231 0.876543 2.02481433 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 62.1 3.43e-5   NTclustered gi|690742623|emb|LN297954.1| 99802 g150779 i0 100 1.94805194805195 33 0 14 0 133 165 186 218 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0082526 blastn 450 62.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
6107792 6107792 PRJNA1028258_P_NODE_131885_length_235_cov_0.855422_g131322_i0 PRJNA1028258 131885 235 0.855422 2.0102417 Metazoa 33208 Platyhelminthes Platyhelminthes 241 4.190000000000001e-59   NTclustered gi|58197522|dbj|AB200392.1| 6161 g131322 i0 85.106 39.2297872340426 235 35 100 0 1 235 294 60 Dugesia japonica CaM mRNA for calmodulin, complete cds blastn 9219 241 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
10367971 10367971 PRJNA1028258_P_NODE_40669_length_396_cov_5.097859_g40106_i0 PRJNA1028258 40669 396 5.097859 20.18752164 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 682 0   NTclustered gi|68479954|gb|DQ076149.1| 6182 g40106 i0 97.727 1 396 9 100 0 1 396 27 422 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 396 682 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
10368413 10368413 PRJNA1028258_P_NODE_60469_length_328_cov_1.096525_g59906_i0 PRJNA1028258 60469 328 1.096525 3.596602 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.031   NTclustered gi|690606904|emb|LN161564.1| 99802 g59906 i0 100 0.0853658536585366 28 0 9 0 200 227 2146 2173 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0016780 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
10368944 10368944 PRJNA1028258_P_NODE_86629_length_277_cov_1.365385_g86066_i0 PRJNA1028258 86629 277 1.365385 3.78211645 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 316 8.179999999999998e-82   NTclustered gi|1369885|gb|L78441.1|SCM14332R 6183 g86066 i0 87.319 1.56678700361011 276 35 99 0 2 277 381 106 Schistosoma mansoni 14-3-3-2 mRNA, 3' end of cds blastn 434 316 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
11644114 11644114 PRJNA1028258_P_NODE_78470_length_291_cov_1.234234_g77907_i0 PRJNA1028258 78470 291 1.234234 3.59162094 Echinococcus granulosus 6210 Platyhelminthes Platyhelminthes 52.8 0.027   NTclustered gi|1373864194|ref|XM_024498474.1| 6210 g77907 i0 100 0.0962199312714777 28 0 10 0 7 34 95 68 Echinococcus granulosus hypothetical protein (EGR_09225), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
15466137 15466137 PRJNA1028258_P_NODE_123393_length_241_cov_2.023256_g122830_i0 PRJNA1028258 123393 241 2.023256 4.87604696 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 424 3.99e-114   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g122830 i0 98.34 9.33195020746888 241 4 100 0 1 241 8442 8682 Stenostomum sthenum mitochondrion, complete genome blastn 2249 424 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
18857805 18857805 PRJNA1028258_P_NODE_73375_length_300_cov_1.852814_g72812_i0 PRJNA1028258 73375 300 1.852814 5.558442 root 1 Root_unresolved Root_unresolved 52.8 0.028   NTclustered gi|55469740|gb|AY791899.1| 6206 g72812 i0 100 0.28 28 0 9 0 57 84 545 518 Taenia saginata 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Taenia Taenia saginata
19289407 19289407 PRJNA1028258_P_NODE_14416_length_669_cov_2.141667_g13913_i0 PRJNA1028258 14416 669 2.141667 14.32775223 Geocentrophora applanata 1468192 Platyhelminthes Platyhelminthes 649 0   NTclustered gi|588313805|gb|KC869763.1| 1468192 g13913 i0 97.872 5.16890881913303 376 7 56 1 1 376 375 1 Geocentrophora applanata 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 3458 649 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Lecithoepitheliata Prorhynchidae Geocentrophora Geocentrophora applanata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;