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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1028258" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1028258 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5266536 5266536 PRJNA1028258_P_NODE_145045_length_232_cov_0.871166_g144482_i0 PRJNA1028258 145045 232 0.871166 2.02110512 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 52.8 0.021   NTclustered gi|1752378893|ref|XM_003729901.3| 7668 g144482 i0 100 0.120689655172414 28 0 12 0 67 94 724 697 PREDICTED: Strongylocentrotus purpuratus insulin-like growth factor-binding protein 2 (LOC100892499), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
6541789 6541789 PRJNA1028258_P_NODE_141726_length_233_cov_0.865854_g141163_i0 PRJNA1028258 141726 233 0.865854 2.01743982 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 89.8 1.59e-13   NTclustered gi|1752336135|ref|XM_030980062.1| 7668 g141163 i0 74.882 3.00858369098712 211 46 90 6 4 212 720 925 PREDICTED: Strongylocentrotus purpuratus calreticulin-like (LOC115921826), mRNA blastn 701 89.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
9093207 9093207 PRJNA1028258_P_NODE_82548_length_284_cov_0.990698_g81985_i0 PRJNA1028258 82548 284 0.990698 2.81358232 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 52.8 0.026   NTclustered gi|2037995396|ref|XM_041610645.1| 7654 g81985 i0 100 0.0985915492957746 28 0 10 0 226 253 505 478 PREDICTED: Lytechinus variegatus calmodulin-like (LOC121417078), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
16306727 16306727 PRJNA1028258_P_NODE_109253_length_253_cov_1.326087_g108690_i0 PRJNA1028258 109253 253 1.326087 3.35500011 Metazoa 33208 Echinodermata other_Eukaryota 52.8 0.023   NTclustered gi|2707360685|ref|XM_054894745.2| 7653 g108690 i0 100 0.245059288537549 28 0 11 0 18 45 1051 1024 PREDICTED: Lytechinus pictus uncharacterized LOC129256576 (LOC129256576), mRNA blastn 62 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
19291702 19291702 PRJNA1028258_P_NODE_99656_length_261_cov_1.479167_g99093_i0 PRJNA1028258 99656 261 1.479167 3.86062587 Acanthaster planci 133434 Echinodermata other_Eukaryota 67.6 8.5e-7   NTclustered gi|1229167704|ref|XM_022241324.1| 133434 g99093 i0 85.714 0.241379310344828 63 9 24 0 129 191 303 365 PREDICTED: Acanthaster planci peptidyl-prolyl cis-trans isomerase FKBP1A-like (LOC110982705), mRNA blastn 63 67.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;