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contig_metadata

24 rows where analysis = "blastn", bioproject = "PRJNA1028258" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 24 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1028258 · 24 ✖

analysis 1

  • blastn · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1438473 1438473 PRJNA1028258_P_NODE_146922_length_232_cov_0.871166_g146359_i0 PRJNA1028258 146922 232 0.871166 2.02110512 Polychytrium aggregatum 110093 Fungi Fungi 268 1.89e-67   NTclustered gi|2432131711|ref|XM_053109357.1| 110093 g146359 i0 87.5 100.75 232 29 100 0 1 232 208 439 Polychytrium aggregatum calmodulin (BJ171DRAFT_488251), mRNA blastn 23374 268 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
1438942 1438942 PRJNA1028258_P_NODE_17802_length_605_cov_2.089552_g17251_i0 PRJNA1028258 17802 605 2.089552 12.6417896 Polychytrium aggregatum 110093 Fungi Fungi 200 2.0199999999999998e-46   NTclustered gi|2432162630|ref|XM_053112000.1| 110093 g17251 i0 76.485 23.0132231404959 404 73 65 16 169 564 523 134 Polychytrium aggregatum ribosomal protein L22/L17 (BJ171DRAFT_515986), mRNA blastn 13923 200 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
5267721 5267721 PRJNA1028258_P_NODE_46345_length_372_cov_1.405941_g45782_i0 PRJNA1028258 46345 372 1.405941 5.23010052 Synchytrium microbalum 1806994 Fungi Fungi 348 4.03e-91   NTclustered gi|1759145969|ref|XM_031167831.1| 1806994 g45782 i0 87.213 81.8978494623656 305 39 82 0 67 371 1966 2270 Synchytrium microbalum uncharacterized protein (SmJEL517_g01903), partial mRNA blastn 30466 348 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
6541741 6541741 PRJNA1028258_P_NODE_139006_length_234_cov_0.860606_g138443_i0 PRJNA1028258 139006 234 0.860606 2.01381804 Polychytrium aggregatum 110093 Fungi Fungi 195 3.29e-45   NTclustered gi|2432132411|ref|XM_053109501.1| 110093 g138443 i0 82.008 6.0982905982906 239 33 100 9 1 234 201 434 Polychytrium aggregatum ribosomal protein L3-domain-containing protein (BJ171DRAFT_489537), mRNA blastn 1427 195 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
6541963 6541963 PRJNA1028258_P_NODE_152786_length_230_cov_1.658385_g152223_i0 PRJNA1028258 152786 230 1.658385 3.8142855 Polychytrium aggregatum 110093 Fungi Fungi 135 1.9800000000000003e-27   NTclustered gi|2432155304|ref|XM_053111518.1| 110093 g152223 i0 77.826 1 230 43 98 6 1 226 90 315 Polychytrium aggregatum ribosomal L27e protein family-domain-containing protein (BJ171DRAFT_510919), mRNA blastn 230 135 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
6543160 6543160 PRJNA1028258_P_NODE_54986_length_343_cov_1.036496_g54423_i0 PRJNA1028258 54986 343 1.036496 3.5551812800000002 Polychytrium aggregatum 110093 Fungi Fungi 261 4.95e-65   NTclustered gi|2432171462|ref|XM_053112561.1| 110093 g54423 i0 80.58 94.8717201166181 345 61 99 6 2 343 1711 1370 Polychytrium aggregatum heat shock protein 90 kDa (BJ171DRAFT_524257), mRNA blastn 32541 261 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
6543328 6543328 PRJNA1028258_P_NODE_62986_length_322_cov_1.122530_g62423_i0 PRJNA1028258 62986 322 1.12253 3.6145466 Polychytrium aggregatum 110093 Fungi Fungi 174 6.18e-39   NTclustered gi|2432142218|ref|XM_053114797.1| 110093 g62423 i0 80 64.8012422360248 245 42 75 5 62 304 501 262 Polychytrium aggregatum ribosomal protein S13/S18-domain-containing protein (BJ171DRAFT_597985), partial mRNA blastn 20866 174 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
6543565 6543565 PRJNA1028258_P_NODE_74666_length_298_cov_1.240175_g74103_i0 PRJNA1028258 74666 298 1.240175 3.6957215 Polychytrium aggregatum 110093 Fungi Fungi 289 1.94e-73   NTclustered gi|2432131102|ref|XM_053109247.1| 110093 g74103 i0 85.714 102.553691275168 273 39 92 0 1 273 153 425 Polychytrium aggregatum putative ubiquitin/ribosomal protein S27a fusion protein (BJ171DRAFT_487026), mRNA blastn 30561 289 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
7815840 7815840 PRJNA1028258_P_NODE_119527_length_244_cov_3.302857_g118964_i0 PRJNA1028258 119527 244 3.302857 8.05897108 Polychytrium aggregatum 110093 Fungi Fungi 132 2.75e-26   NTclustered gi|2432139102|ref|XM_053107495.1| 110093 g118964 i0 77.328 32.0614754098361 247 40 98 14 6 244 67 305 Polychytrium aggregatum ribosomal protein L34e-domain-containing protein (BJ171DRAFT_421619), partial mRNA blastn 7823 132 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
7818152 7818152 PRJNA1028258_P_NODE_76767_length_294_cov_1.302222_g76204_i0 PRJNA1028258 76767 294 1.302222 3.82853268 Synchytrium microbalum 1806994 Fungi Fungi 121 7.37e-23   NTclustered gi|1759151272|ref|XM_031169209.1| 1806994 g76204 i0 83.333 18.656462585034 132 20 45 2 16 146 295 425 Synchytrium microbalum uncharacterized protein (SmJEL517_g03281), partial mRNA blastn 5485 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
11208980 11208980 PRJNA1028258_P_NODE_49289_length_361_cov_1.750000_g48726_i0 PRJNA1028258 49289 361 1.75 6.3175 Fungi 4751 Fungi Fungi 206 2.4799999999999994e-48   NTclustered gi|2432143272|ref|XM_053110602.1| 110093 g48726 i0 87.931 43.9667590027701 174 21 48 0 98 271 177 350 Polychytrium aggregatum 40S ribosomal protein S28 (BJ171DRAFT_500751), mRNA blastn 15872 206 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
11643408 11643408 PRJNA1028258_P_NODE_42310_length_389_cov_1.290625_g41747_i0 PRJNA1028258 42310 389 1.290625 5.02053125 Polychytrium aggregatum 110093 Fungi Fungi 217 1.25e-51   NTclustered gi|2432132239|ref|XM_053109464.1| 110093 g41747 i0 79.154 7.24935732647815 331 55 83 11 67 387 219 545 Polychytrium aggregatum ribosomal protein S17-domain-containing protein (BJ171DRAFT_489270), mRNA blastn 2820 217 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
12919126 12919126 PRJNA1028258_P_NODE_71811_length_303_cov_1.726496_g71248_i0 PRJNA1028258 71811 303 1.726496 5.23128288 Polychytrium aggregatum 110093 Fungi Fungi 337 6.959999999999998e-88   NTclustered gi|2432142218|ref|XM_053114797.1| 110093 g71248 i0 90 84.2673267326733 260 26 86 0 1 260 248 507 Polychytrium aggregatum ribosomal protein S13/S18-domain-containing protein (BJ171DRAFT_597985), partial mRNA blastn 25533 337 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
13759688 13759688 PRJNA1028258_P_NODE_83611_length_282_cov_1.248826_g83048_i0 PRJNA1028258 83611 282 1.248826 3.52168932 Opisthokonta 33154 Fungi Fungi 80.5 1.19e-10   NTclustered gi|1866582795|gb|MT730970.1| 4814 g83048 i0 97.826 17.4539007092199 46 1 16 0 237 282 4441 4486 Chytriomyces hyalinus isolate PLAUS Ob-1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4922 80.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
16742590 16742590 PRJNA1028258_P_NODE_83554_length_282_cov_1.333333_g82991_i0 PRJNA1028258 83554 282 1.333333 3.75999906 Fimicolochytrium jonesii 1396493 Fungi Fungi 185 2.46e-42   NTclustered gi|2432058109|ref|XM_053065686.1| 1396493 g82991 i0 78.853 19 279 55 98 4 1 277 113 389 Fimicolochytrium jonesii elongation factor alpha-like protein (EV422DRAFT_244629), mRNA blastn 5358 185 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
17584261 17584261 PRJNA1028258_P_NODE_89774_length_272_cov_1.300493_g89211_i0 PRJNA1028258 89774 272 1.300493 3.53734096 Neocallimastigaceae 29007 Fungi Fungi 497 2.67e-136   NTclustered gi|55859492|emb|AJ864475.1| 301046 g89211 i0 99.632 104.599264705882 272 1 100 0 1 272 3993 4264 Orpinomyces sp. OUS1 partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial 28S rRNA, clone V5-1 blastn 28451 497 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Orpinomyces Orpinomyces sp. OUS1
18016452 18016452 PRJNA1028258_P_NODE_32595_length_444_cov_2.365333_g32033_i0 PRJNA1028258 32595 444 2.365333 10.50207852 Fimicolochytrium jonesii 1396493 Fungi Fungi 128 6.94e-25   NTclustered gi|2432097581|ref|XM_053071233.1| 1396493 g32033 i0 82.313 4.39189189189189 147 26 33 0 275 421 229 83 Fimicolochytrium jonesii 30S ribosomal protein S30e (EV422DRAFT_541825), mRNA blastn 1950 128 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
19289472 19289472 PRJNA1028258_P_NODE_147916_length_232_cov_0.773006_g147353_i0 PRJNA1028258 147916 232 0.773006 1.79337392 Polychytrium aggregatum 110093 Fungi Fungi 124 4.33e-24   NTclustered gi|2432158676|ref|XM_053113190.1| 110093 g147353 i0 78.919 62.875 185 37 79 2 48 231 66 249 Polychytrium aggregatum ribosomal protein S25 component of cytosolic 80S ribosome and 40S small subunit (BJ171DRAFT_559057), partial mRNA blastn 14587 124 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
20564282 20564282 PRJNA1028258_P_NODE_112037_length_251_cov_1.109890_g111474_i0 PRJNA1028258 112037 251 1.10989 2.7858239 Spizellomyces punctatus 109760 Fungi Fungi 91.6 4.82e-14   NTclustered gi|1027029571|ref|XR_001677165.1| 645134 g111474 i0 90 0.836653386454183 70 7 28 0 22 91 2772 2703 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11007), partial rRNA blastn 210 91.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
21841094 21841094 PRJNA1028258_P_NODE_177418_length_225_cov_0.910256_g176855_i0 PRJNA1028258 177418 225 0.910256 2.048076 Fimicolochytrium jonesii 1396493 Fungi Fungi 97.1 9.11e-16   NTclustered gi|2432086327|ref|XM_053070773.1| 1396493 g176855 i0 84.694 0.435555555555556 98 13 43 2 1 97 618 714 Fimicolochytrium jonesii ribosomal protein L10e/L16 (EV422DRAFT_535715), mRNA blastn 98 97.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
21841394 21841394 PRJNA1028258_P_NODE_26998_length_489_cov_2.028571_g26438_i0 PRJNA1028258 26998 489 2.028571 9.91971219 Synchytrium microbalum 1806994 Fungi Fungi 379 1.93e-100   NTclustered gi|1759169267|ref|XM_031172234.1| 1806994 g26438 i0 83.879 80.760736196319 397 64 81 0 93 489 1 397 Synchytrium microbalum uncharacterized protein (SmJEL517_g06308), partial mRNA blastn 39492 379 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
24391008 24391008 PRJNA1028258_P_NODE_48700_length_363_cov_2.102041_g48137_i0 PRJNA1028258 48700 363 2.102041 7.63040883 Spizellomyces punctatus 109760 Fungi Fungi 224 6.89e-54   NTclustered gi|1027002514|ref|XM_016754407.1| 645134 g48137 i0 79.268 64.7575757575758 328 63 90 5 39 363 499 174 Spizellomyces punctatus DAOM BR117 ubiquitin-40S ribosomal protein S27a (SPPG_06203), partial mRNA blastn 23507 224 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
24391535 24391535 PRJNA1028258_P_NODE_73660_length_300_cov_1.160173_g73097_i0 PRJNA1028258 73660 300 1.160173 3.480519 Spizellomyces punctatus 109760 Fungi Fungi 115 3.51e-21   NTclustered gi|1026959854|ref|XM_016750634.1| 645134 g73097 i0 85.455 24.2433333333333 110 16 37 0 185 294 196 305 Spizellomyces punctatus DAOM BR117 histone H2B (SPPG_02345), mRNA blastn 7273 115 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
25232585 25232585 PRJNA1028258_P_NODE_86000_length_278_cov_1.358852_g85437_i0 PRJNA1028258 86000 278 1.358852 3.77760856 Fungi 4751 Fungi Fungi 200 8.639999999999998e-47   NTclustered gi|2432146664|ref|XM_053113161.1| 110093 g85437 i0 79.71 5.76258992805755 276 56 99 0 1 276 369 94 Polychytrium aggregatum 40S ribosomal protein S22-A (BJ171DRAFT_558627), partial mRNA blastn 1602 200 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;