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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA1028258" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA1028258 · 30 ✖

analysis 1

  • blastn · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1439397 1439397 PRJNA1028258_P_NODE_33942_length_435_cov_1.551913_g33379_i0 PRJNA1028258 33942 435 1.551913 6.75082155 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 455 2.7400000000000004e-123   NTclustered gi|238617636|gb|FJ973397.1| 45107 g33379 i0 85.681 99.6850574712644 433 60 99 2 4 435 1067 636 Heteromita globosa strain ATCC 50780 actin (act) gene, partial cds blastn 43363 455 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
3991654 3991654 PRJNA1028258_P_NODE_57724_length_335_cov_1.466165_g57161_i0 PRJNA1028258 57724 335 1.466165 4.91165275 Spongomonas sp. ATCC 50405 862245 SAR_Eukaryotes SAR_Eukaryotes 292 1.71e-74   NTclustered gi|300676740|gb|GQ377650.1| 862245 g57161 i0 82.583 98.0537313432836 333 56 99 2 4 335 730 399 Spongomonas sp. ATCC 50405 actin gene, partial cds blastn 32848 292 1 Eukaryota Sar   Cercozoa Imbricatea Spongomonadida Spongomonadidae Spongomonas Spongomonas sp. ATCC 50405
5266601 5266601 PRJNA1028258_P_NODE_148945_length_231_cov_1.314815_g148382_i0 PRJNA1028258 148945 231 1.314815 3.03722265 Gymnophrys sp. ATCC 50923 646463 SAR_Eukaryotes SAR_Eukaryotes 283 6.72e-72   NTclustered gi|238617638|gb|FJ973398.1| 646463 g148382 i0 88.745 95.991341991342 231 26 100 0 1 231 530 760 Gymnophrys sp. ATCC 50923 actin (act) gene, partial cds blastn 22174 283 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys sp. ATCC 50923
5266882 5266882 PRJNA1028258_P_NODE_166645_length_227_cov_0.898734_g166082_i0 PRJNA1028258 166645 227 0.898734 2.04012618 Cercomonas sp. ATCC PRA-21 439943 SAR_Eukaryotes SAR_Eukaryotes 298 2.35e-76   NTclustered gi|160337396|gb|EF455796.1| 439943 g166082 i0 90.308 51.5374449339207 227 22 100 0 1 227 245 19 Cercomonas sp. ATCC PRA-21 beta-tubulin (btub) gene, partial cds blastn 11699 298 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. ATCC PRA-21
5267142 5267142 PRJNA1028258_P_NODE_18965_length_586_cov_1.839458_g18410_i0 PRJNA1028258 18965 586 1.839458 10.77922388 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 551 4.679999999999998e-152   NTclustered gi|301014702|gb|GQ377715.1| 323453 g18410 i0 88.791 56.7866894197952 455 44 77 7 134 584 491 40 Heteromita sp. PRA-74 ribosomal protein S23a (rps23a) mRNA, complete cds blastn 33277 551 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
5267609 5267609 PRJNA1028258_P_NODE_40725_length_396_cov_2.119266_g40162_i0 PRJNA1028258 40725 396 2.119266 8.39229336 Thaumatomonas seravini 188939 SAR_Eukaryotes SAR_Eukaryotes 300 1.23e-76   NTclustered gi|160337323|gb|EF455755.1| 188939 g40162 i0 80.451 95.4217171717172 399 72 100 6 1 396 353 748 Thaumatomonas seravini actin gene, partial cds blastn 37787 300 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas seravini
6108056 6108056 PRJNA1028258_P_NODE_164545_length_228_cov_0.893082_g163982_i0 PRJNA1028258 164545 228 0.893082 2.03622696 Cercomonadida 188941 SAR_Eukaryotes SAR_Eukaryotes 161 3.2399999999999997e-35   NTclustered gi|88792583|gb|DQ386164.1| 372086 g163982 i0 92.241 50.9166666666667 116 6 50 3 17 131 2030 1917 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 11609 161 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
7815630 7815630 PRJNA1028258_P_NODE_108647_length_253_cov_2.157609_g108084_i0 PRJNA1028258 108647 253 2.157609 5.45875077 Paulinella micropora 1928728 SAR_Eukaryotes SAR_Eukaryotes 187 6.0299999999999984e-43   NTclustered gi|1389527545|dbj|LC383945.1| 1928728 g108084 i0 85.165 31.5454545454545 182 27 72 0 18 199 415 234 Paulinella micropora gene for actin, complete cds blastn 7981 187 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella micropora
7817947 7817947 PRJNA1028258_P_NODE_66387_length_314_cov_1.542857_g65824_i0 PRJNA1028258 66387 314 1.542857 4.84457098 Phytocercomonas venanatans 2065209 SAR_Eukaryotes SAR_Eukaryotes 287 7.399999999999999e-73   NTclustered gi|1315527746|gb|MF034898.1| 2065209 g65824 i0 90.09 66.8216560509554 222 20 70 2 94 314 1407 1187 Phytocercomonas venanatans actin gene, complete cds blastn 20982 287 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Phytocercomonas Phytocercomonas venanatans
9090612 9090612 PRJNA1028258_P_NODE_107428_length_254_cov_2.475676_g106865_i0 PRJNA1028258 107428 254 2.475676 6.28821704 Thaumatomonas sp. DDM-2005 310812 SAR_Eukaryotes SAR_Eukaryotes 270 5.8499999999999984e-68   NTclustered gi|58414952|gb|AY748811.1| 310812 g106865 i0 85.827 134.425196850394 254 36 100 0 1 254 254 1 Thaumatomonas sp. DDM-2005 polyubiquitin (UBQ) gene, partial cds blastn 34144 270 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas sp. DDM-2005
9091429 9091429 PRJNA1028258_P_NODE_153048_length_230_cov_1.465839_g152485_i0 PRJNA1028258 153048 230 1.465839 3.3714297 Mesofila sp. ATCC PRA-54 439948 SAR_Eukaryotes SAR_Eukaryotes 202 1.93e-47   NTclustered gi|160337351|gb|EF455772.1| 439948 g152485 i0 82.609 85.2391304347826 230 38 99 2 2 230 308 536 Dimorpha sp. ATCC PRA-54 clone 1 actin gene, partial cds blastn 19605 202 1 Eukaryota Sar   Cercozoa     Mesofilidae Mesofila Mesofila sp. ATCC PRA-54
9932869 9932869 PRJNA1028258_P_NODE_156688_length_229_cov_2.443750_g156125_i0 PRJNA1028258 156688 229 2.44375 5.5961875 Aquavolon 2069449 SAR_Eukaryotes SAR_Eukaryotes 63.9 9.44e-6   NTclustered gi|311409110|gb|HQ219347.1| 175275 g156125 i0 93.023 16.5938864628821 43 3 19 0 186 228 862 904 Uncultured cercozoan clone AY2009C14 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 3800 63.9 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
9932930 9932930 PRJNA1028258_P_NODE_163488_length_228_cov_0.893082_g162925_i0 PRJNA1028258 163488 228 0.893082 2.03622696 Limnofila 1938467 SAR_Eukaryotes SAR_Eukaryotes 422 1.34e-113   NTclustered gi|48727780|gb|AY620270.1| 175275 g162925 i0 100 99.7543859649123 228 0 100 0 1 228 599 826 Uncultured cercozoan clone 4-6.2 small subunit ribosomal RNA gene, partial sequence blastn 22744 422 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
10368596 10368596 PRJNA1028258_P_NODE_69369_length_308_cov_1.351464_g68806_i0 PRJNA1028258 69369 308 1.351464 4.16250912 Cercomonas sp. ATCC PRA-21 439943 SAR_Eukaryotes SAR_Eukaryotes 331 3.3e-86   NTclustered gi|160337396|gb|EF455796.1| 439943 g68806 i0 86.039 88.1493506493507 308 43 100 0 1 308 456 763 Cercomonas sp. ATCC PRA-21 beta-tubulin (btub) gene, partial cds blastn 27150 331 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. ATCC PRA-21
11641898 11641898 PRJNA1028258_P_NODE_12130_length_726_cov_2.920852_g11643_i0 PRJNA1028258 12130 726 2.920852 21.20538552 Capsellina sp. ATCC 50039 862254 SAR_Eukaryotes SAR_Eukaryotes 501 6e-137   NTclustered gi|300676728|gb|GQ377659.1| 862254 g11643 i0 81.494 101.026170798898 616 108 84 6 114 726 2 614 Capsellina sp. ATCC 50039 alpha-tubulin (Atub) gene, partial cds blastn 73345 501 1 Eukaryota Sar   Cercozoa Thecofilosea Cryomonadida Rhogostomidae Capsellina Capsellina sp. ATCC 50039
11643391 11643391 PRJNA1028258_P_NODE_41670_length_392_cov_1.083591_g41107_i0 PRJNA1028258 41670 392 1.083591 4.24767672 Thaumatomonas sp. TMT002 407209 SAR_Eukaryotes SAR_Eukaryotes 496 1.44e-135   NTclustered gi|116222176|gb|DQ980464.1| 407209 g41107 i0 89.744 79.9030612244898 390 37 99 1 3 392 14 400 Thaumatomonas sp. TMT002 Hsp90 mRNA, partial cds blastn 31322 496 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas sp. TMT002
12917190 12917190 PRJNA1028258_P_NODE_131051_length_235_cov_1.638554_g130488_i0 PRJNA1028258 131051 235 1.638554 3.8506019 Cercomonas alexieffi 188951 SAR_Eukaryotes SAR_Eukaryotes 429 8.33e-116   NTclustered gi|33309621|gb|AF411267.1| 188951 g130488 i0 99.574 99.0042553191489 235 1 100 0 1 235 913 679 Cercomonas alexieffi 18S ribosomal RNA gene, complete sequence blastn 23266 429 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas alexieffi
12917783 12917783 PRJNA1028258_P_NODE_169011_length_227_cov_0.898734_g168448_i0 PRJNA1028258 169011 227 0.898734 2.04012618 Mesofila sp. ATCC PRA-54 439948 SAR_Eukaryotes SAR_Eukaryotes 237 5.199999999999999e-58   NTclustered gi|160337346|gb|EF455768.1| 439948 g168448 i0 85.778 82.9691629955947 225 30 99 2 3 226 750 527 Dimorpha sp. ATCC PRA-54 alpha-tubulin (atub) gene, partial cds blastn 18834 237 1 Eukaryota Sar   Cercozoa     Mesofilidae Mesofila Mesofila sp. ATCC PRA-54
12918935 12918935 PRJNA1028258_P_NODE_61831_length_325_cov_0.894531_g61268_i0 PRJNA1028258 61831 325 0.894531 2.90722575 Thaumatomastix sp. NIES-2378 717846 SAR_Eukaryotes SAR_Eukaryotes 283 9.95e-72   NTclustered gi|302563030|dbj|AB546338.1| 717846 g61268 i0 81.595 24.9323076923077 326 58 100 2 1 325 910 586 Thaumatomastix sp. NIES-2378 EFL mRNA for elongation factor like, partial cds blastn 8103 283 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomastix Thaumatomastix sp. NIES-2378
12919616 12919616 PRJNA1028258_P_NODE_96651_length_264_cov_1.456410_g96088_i0 PRJNA1028258 96651 264 1.45641 3.8449224 Amorphochlora amoebiformis 1561963 SAR_Eukaryotes SAR_Eukaryotes 278 3.65e-70   NTclustered gi|33346934|gb|AY251797.1| 1561963 g96088 i0 88.596 80.3560606060606 228 26 86 0 1 228 453 226 Lotharella amoeboformis ubiquitin/actin fusion protein 2 gene, partial cds blastn 21214 278 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Amorphochlora Amorphochlora amoebiformis
14191666 14191666 PRJNA1028258_P_NODE_10812_length_766_cov_2.655667_g10342_i0 PRJNA1028258 10812 766 2.6556670000000002 20.34240922 Lecythium sp. 3678_261K 238773 SAR_Eukaryotes SAR_Eukaryotes 976 0   NTclustered gi|33089893|gb|AY283756.1| 238773 g10342 i0 92.857 70.3498694516971 672 48 88 0 95 766 768 97 Lecythium sp. 3678_261K actin gene, partial cds blastn 53888 976 1 Eukaryota Sar   Cercozoa Thecofilosea Tectofilosida Chlamydophryidae Lecythium Lecythium sp. 3678_261K
15466362 15466362 PRJNA1028258_P_NODE_135933_length_234_cov_1.290909_g135370_i0 PRJNA1028258 135933 234 1.290909 3.02072706 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 209 1.18e-49   NTclustered gi|238617605|gb|FJ973380.1| 45107 g135370 i0 84.977 73.0299145299145 213 25 90 6 18 228 1559 1352 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 17089 209 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
16742131 16742131 PRJNA1028258_P_NODE_60474_length_328_cov_1.096525_g59911_i0 PRJNA1028258 60474 328 1.096525 3.596602 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 248 3.67e-61   NTclustered gi|300676720|gb|GQ377713.1| 323453 g59911 i0 86.996 16.3841463414634 223 25 67 4 7 227 225 5 Heteromita sp. PRA-74 gcr5-like mRNA, partial sequence blastn 5374 248 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
18014963 18014963 PRJNA1028258_P_NODE_112115_length_251_cov_0.983516_g111552_i0 PRJNA1028258 112115 251 0.983516 2.46862516 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 220 5.89e-53   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g111552 i0 82.812 29.394422310757 256 34 100 10 1 251 3734 3984 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 7378 220 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
19290737 19290737 PRJNA1028258_P_NODE_50336_length_358_cov_0.878893_g49773_i0 PRJNA1028258 50336 358 0.878893 3.14643694 Thaumatomonas sp. TMT002 407209 SAR_Eukaryotes SAR_Eukaryotes 331 3.8900000000000004e-86   NTclustered gi|193875699|gb|EU812202.1| 407209 g49773 i0 84.802 0.918994413407821 329 50 92 0 2 330 529 857 Thaumatomonas sp. TMT002 clone tshsp70-1 70 kDa heat shock protein mRNA, partial cds blastn 329 331 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas sp. TMT002
19291348 19291348 PRJNA1028258_P_NODE_80796_length_287_cov_1.261468_g80233_i0 PRJNA1028258 80796 287 1.261468 3.62041316 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 531 2.799999999999999e-146   NTclustered gi|33309639|gb|AF411276.1| 188950 g80233 i0 100 97.5574912891986 287 0 100 0 1 287 668 954 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 27999 531 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
20566654 20566654 PRJNA1028258_P_NODE_75277_length_297_cov_1.078947_g74714_i0 PRJNA1028258 75277 297 1.078947 3.20447259 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 350 8.74e-92   NTclustered gi|300676732|gb|GQ377662.1| 188950 g74714 i0 87.879 93.9494949494949 297 36 100 0 1 297 846 550 Bodomorpha minima alpha-tubulin (Atub) gene, partial cds blastn 27903 350 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
23115317 23115317 PRJNA1028258_P_NODE_109879_length_252_cov_2.021858_g109316_i0 PRJNA1028258 109879 252 2.021858 5.09508216 Lotharella globosa 91324 SAR_Eukaryotes SAR_Eukaryotes 222 1.65e-53   NTclustered gi|33346940|gb|AY251800.1| 91324 g109316 i0 94.444 98.8452380952381 144 8 57 0 13 156 64 207 Lotharella globosa ubiquitin/actin fusion protein 2 gene, partial cds blastn 24909 222 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Lotharella Lotharella globosa
24389093 24389093 PRJNA1028258_P_NODE_107260_length_255_cov_1.080645_g106697_i0 PRJNA1028258 107260 255 1.080645 2.75564475 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 327 3.44e-85   NTclustered gi|302026154|gb|GQ377660.1| 188950 g106697 i0 89.804 87.843137254902 255 26 100 0 1 255 543 797 Bodomorpha minima beta-tubulin (Btub) gene, partial cds blastn 22400 327 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
24390943 24390943 PRJNA1028258_P_NODE_45740_length_374_cov_2.265574_g45177_i0 PRJNA1028258 45740 374 2.265574 8.47324676 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 414 3.94e-111   NTclustered gi|300676716|gb|GQ377714.1| 323453 g45177 i0 86.863 78.6657754010695 373 45 99 3 1 373 411 43 Heteromita sp. PRA-74 rps22a (rps22a) mRNA, complete cds blastn 29421 414 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;