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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA1028258" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA1028258 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3992133 3992133 PRJNA1028258_P_NODE_81764_length_285_cov_1.314815_g81201_i0 PRJNA1028258 81764 285 1.314815 3.74722275 Cryptosporidium sp. chipmunk genotype I 1280935 SAR_Eukaryotes SAR_Eukaryotes 91.6 5.58e-14   NTclustered gi|2787701993|ref|XM_067346770.1| 1280935 g81201 i0 81.197 1.89122807017544 117 18 40 4 1 115 986 872 Cryptosporidium sp. chipmunk genotype I CCT chaperonin gamma subunit (ELE39_003743), partial mRNA blastn 539 91.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium sp. chipmunk genotype I
5266807 5266807 PRJNA1028258_P_NODE_161785_length_228_cov_1.339623_g161222_i0 PRJNA1028258 161785 228 1.339623 3.05434044 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|1620166007|ref|XM_028680878.1| 880535 g161222 i0 94.444 0.157894736842105 36 1 16 1 51 86 2360 2394 Plasmodium sp. gorilla clade G2 conserved Plasmodium protein, unknown function (PADL01_0614700), partial mRNA blastn 36 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
5266976 5266976 PRJNA1028258_P_NODE_174105_length_225_cov_1.820513_g173542_i0 PRJNA1028258 174105 225 1.820513 4.09615425 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 58.4 4.3e-4   NTclustered gi|820693866|tpe|LN714486.1| 572307 g173542 i0 100 8.14222222222222 31 0 14 0 28 58 1536455 1536485 TPA_asm: Neospora caninum Liverpool, chromosome chrXI, complete genome blastn 1832 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
5268207 5268207 PRJNA1028258_P_NODE_71045_length_305_cov_1.105932_g70482_i0 PRJNA1028258 71045 305 1.105932 3.3730926 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.028   NTclustered gi|916512145|ref|XM_013500787.1| 44415 g70482 i0 100 0.0918032786885246 28 0 9 0 102 129 85 112 Eimeria mitis uncharacterized protein (EMH_0017060), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
9091322 9091322 PRJNA1028258_P_NODE_146588_length_232_cov_0.871166_g146025_i0 PRJNA1028258 146588 232 0.871166 2.02110512 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 161 3.3e-35   NTclustered gi|669196535|ref|XM_008625057.1| 54757 g146025 i0 86 3.97844827586207 150 21 65 0 69 218 2877 3026 Plasmodium vinckei vinckei regulator of nonsense transcripts 1, putative (PVVCY_1200440), partial mRNA blastn 923 161 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
9932733 9932733 PRJNA1028258_P_NODE_140648_length_233_cov_0.865854_g140085_i0 PRJNA1028258 140648 233 0.865854 2.01743982 Conoidasida 1280412 SAR_Eukaryotes SAR_Eukaryotes 185 1.9699999999999998e-42   NTclustered gi|1673114745|ref|XM_029362621.1| 94643 g140085 i0 81.304 7.43347639484979 230 41 98 2 5 233 793 1021 Besnoitia besnoiti putative vacuolar ATP synthase subunit b (BESB_040350), partial mRNA blastn 1732 185 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
11208224 11208224 PRJNA1028258_P_NODE_168529_length_227_cov_0.898734_g167966_i0 PRJNA1028258 168529 227 0.898734 2.04012618 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|820698945|tpe|LN714498.1| 432359 g167966 i0 100 0.255506607929515 29 0 13 0 19 47 1349574 1349602 TPA_asm: Toxoplasma gondii VEG, chromosome chrVIII, complete genome blastn 58 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
14192667 14192667 PRJNA1028258_P_NODE_167092_length_227_cov_0.898734_g166529_i0 PRJNA1028258 167092 227 0.898734 2.04012618 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 71.3 5.58e-8   NTclustered gi|820688590|tpe|LN714475.1| 572307 g166529 i0 93.617 0.819383259911894 47 3 21 0 161 207 1673095 1673141 TPA_asm: Neospora caninum Liverpool, chromosome chrIb, complete genome blastn 186 71.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
14192868 14192868 PRJNA1028258_P_NODE_180192_length_219_cov_2.326667_g179629_i0 PRJNA1028258 180192 219 2.326667 5.09540073 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.019   NTclustered gi|915003258|ref|XM_013393585.1| 5801 g179629 i0 100 0.127853881278539 28 0 13 0 82 109 884 857 Eimeria acervulina hypothetical protein, conserved partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
15466580 15466580 PRJNA1028258_P_NODE_150153_length_231_cov_0.876543_g149590_i0 PRJNA1028258 150153 231 0.876543 2.02481433 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 176 1.17e-39   NTclustered gi|401402052|ref|XM_003881109.1| 572307 g149590 i0 80.702 58.2077922077922 228 42 98 2 1 227 311 85 Neospora caninum Liverpool putative ubiquitin / ribosomal protein CEP52 fusion protein (NCLIV_042000), partial mRNA blastn 13446 176 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
20565220 20565220 PRJNA1028258_P_NODE_166117_length_227_cov_1.348101_g165554_i0 PRJNA1028258 166117 227 1.348101 3.06018927 Plasmodium vivax 5855 SAR_Eukaryotes SAR_Eukaryotes 126 1.17e-24   NTclustered gi|156101004|ref|XM_001616146.1| 5855 g165554 i0 79.661 4.88105726872247 177 34 78 2 35 210 364 539 Plasmodium vivax 60S ribosomal protein L27a, putative (PVX_114040), mRNA blastn 1108 126 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vivax
20567035 20567035 PRJNA1028258_P_NODE_96877_length_264_cov_1.312821_g96314_i0 PRJNA1028258 96877 264 1.312821 3.46584744 Babesia caballi 5871 SAR_Eukaryotes SAR_Eukaryotes 102 2.36e-17   NTclustered gi|2794947469|ref|XM_067860723.1| 5871 g96314 i0 81.25 2.31439393939394 128 22 48 2 39 165 1341 1467 Babesia caballi uncharacterized protein (BcabD6B2_41900), partial mRNA blastn 611 102 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi
23115834 23115834 PRJNA1028258_P_NODE_137899_length_234_cov_0.860606_g137336_i0 PRJNA1028258 137899 234 0.860606 2.01381804 Theileria parva 5875 SAR_Eukaryotes SAR_Eukaryotes 71.3 5.79e-8   NTclustered gi|472824884|dbj|AB739690.1| 5875 g137336 i0 83.544 1.04700854700855 79 9 33 3 26 102 3771 3695 Theileria parva TP03_0861 gene for P150 microsphere antigen, complete cds, strain: BuffaloLAWR blastn 245 71.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria parva
23956791 23956791 PRJNA1028258_P_NODE_121939_length_242_cov_7.173410_g121376_i0 PRJNA1028258 121939 242 7.17341 17.3596522 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|1145260771|ref|XM_020114999.1| 5854 g121376 i0 90.476 0.764462809917355 42 4 17 0 161 202 66 25 Plasmodium reichenowi 60S ribosomal protein L41, putative partial mRNA blastn 185 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;