RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1028258" and tax_clade = "ant, tsetse, mealybug, aphid, etc. endosymbionts"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • ant, tsetse, mealybug, aphid, etc. endosymbionts · 2 ✖

bioproject 1

  • PRJNA1028258 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2714357 2714357 PRJNA1028258_P_NODE_157503_length_229_cov_1.337500_g156940_i0 PRJNA1028258 157503 229 1.3375 3.062875 Candidatus Williamhamiltonella defendens 138072 Bacteria Bacteria 418 1.7499999999999995e-112   NTclustered gi|1236402697|gb|CP022935.1| 138072 g156940 i0 99.563 7.03930131004367 229 1 100 0 1 229 32472 32244 Candidatus Hamiltonella defensa strain MI47 plasmid p3_M47_H.defensa sequence blastn 1612 418 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Williamhamiltonella Candidatus Williamhamiltonella defendens
16742417 16742417 PRJNA1028258_P_NODE_74654_length_298_cov_1.240175_g74091_i0 PRJNA1028258 74654 298 1.240175 3.6957215 Candidatus Annandia adelgestsuga 1302411 Bacteria Bacteria 161 4.41e-35   NTclustered gi|1538953316|gb|CP026513.1| 1302411 g74091 i0 81.407 21.4798657718121 199 36 66 1 51 248 130157 129959 Candidatus Annandia adelgestsuga isolate ENA chromosome blastn 6401 161 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Annandia Candidatus Annandia adelgestsuga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;