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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA1028258" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 9 ✖

bioproject 1

  • PRJNA1028258 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
164492 164492 PRJNA1028258_P_NODE_28341_length_477_cov_2.522059_g27780_i0 PRJNA1028258 28341 477 2.522059 12.03022143 Thecamonas trahens 529818 Root_unresolved Root_unresolved 224 9.3e-54   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g27780 i0 78.249 32.8805031446541 377 62 76 15 98 461 198 567 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 15684 224 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
1438063 1438063 PRJNA1028258_P_NODE_121882_length_243_cov_1.005747_g121319_i0 PRJNA1028258 121882 243 1.005747 2.44396521 Thecamonas trahens 529818 Root_unresolved Root_unresolved 302 1.97e-77   NTclustered gi|923122580|ref|XM_013899306.1| 461836 g121319 i0 89.212 99.9917695473251 241 26 99 0 3 243 960 1200 Thecamonas trahens ATCC 50062 heat shock protein 90A (AMSG_09389), mRNA blastn 24298 302 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
5267421 5267421 PRJNA1028258_P_NODE_31765_length_450_cov_2.328084_g31203_i0 PRJNA1028258 31765 450 2.328084 10.476378 Thecamonas trahens 529818 Root_unresolved Root_unresolved 224 8.729999999999998e-54   NTclustered gi|923125359|ref|XM_013900694.1| 461836 g31203 i0 82.879 43.2266666666667 257 36 56 6 190 442 277 529 Thecamonas trahens ATCC 50062 calmodulin (AMSG_07687), mRNA blastn 19452 224 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
5267580 5267580 PRJNA1028258_P_NODE_39245_length_404_cov_1.289552_g38682_i0 PRJNA1028258 39245 404 1.289552 5.20979008 Thecamonas trahens 529818 Root_unresolved Root_unresolved 213 1.68e-50   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g38682 i0 81.579 35.2722772277228 266 41 64 5 90 348 427 163 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 14250 213 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
6541449 6541449 PRJNA1028258_P_NODE_121166_length_243_cov_1.632184_g120603_i0 PRJNA1028258 121166 243 1.632184 3.96620712 Thecamonas trahens 529818 Root_unresolved Root_unresolved 154 5.84e-33   NTclustered gi|923123658|ref|XM_013899844.1| 461836 g120603 i0 84.146 8.559670781893 164 20 67 3 30 193 265 422 Thecamonas trahens ATCC 50062 ubiquitin/ribosomal protein S27 fusion protein (AMSG_08067), partial mRNA blastn 2080 154 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
10368527 10368527 PRJNA1028258_P_NODE_65429_length_316_cov_1.834008_g64866_i0 PRJNA1028258 65429 316 1.834008 5.79546528 Thecamonas trahens 529818 Root_unresolved Root_unresolved 220 7.67e-53   NTclustered gi|923123284|ref|XM_013899657.1| 461836 g64866 i0 83.539 42.2246835443038 243 32 76 7 8 246 356 118 Thecamonas trahens ATCC 50062 peroxiredoxin (AMSG_08693), mRNA blastn 13343 220 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
15468687 15468687 PRJNA1028258_P_NODE_95693_length_265_cov_1.448980_g95130_i0 PRJNA1028258 95693 265 1.44898 3.839797 Thecamonas trahens 529818 Root_unresolved Root_unresolved 63.9 1.12e-5   NTclustered gi|923118232|ref|XM_013897139.1| 461836 g95130 i0 97.297 0.279245283018868 37 1 14 0 134 170 153 189 Thecamonas trahens ATCC 50062 60S ribosomal protein L7 (AMSG_11553), partial mRNA blastn 74 63.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16740556 16740556 PRJNA1028258_P_NODE_138954_length_234_cov_0.860606_g138391_i0 PRJNA1028258 138954 234 0.860606 2.01381804 Thecamonas trahens 529818 Root_unresolved Root_unresolved 56.5 0.002   NTclustered gi|923119197|ref|XM_013897619.1| 461836 g138391 i0 96.97 0.141025641025641 33 1 14 0 200 232 573 541 Thecamonas trahens ATCC 50062 poly-zinc finger protein 1 (AMSG_11014), partial mRNA blastn 33 56.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
19290660 19290660 PRJNA1028258_P_NODE_46036_length_373_cov_1.802632_g45473_i0 PRJNA1028258 46036 373 1.802632 6.72381736 Thecamonas trahens 529818 Root_unresolved Root_unresolved 124 7.41e-24   NTclustered gi|923118232|ref|XM_013897139.1| 461836 g45473 i0 83.969 0.702412868632708 131 19 35 2 18 147 362 233 Thecamonas trahens ATCC 50062 60S ribosomal protein L7 (AMSG_11553), partial mRNA blastn 262 124 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;