RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1025141" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1025141 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2713152 2713152 PRJNA1025141_P_NODE_11983_length_244_cov_0.900585_g11922_i0 PRJNA1025141 11983 244 0.900585 2.1974274 Diadema antillarum 105358 Echinodermata other_Eukaryota 185 2.0799999999999994e-42   NTclustered gi|2919559860|ref|XM_071624315.1| 105358 g11922 i0 80.579 40.827868852459 242 45 99 2 1 241 1270 1030 PREDICTED: Diadema antillarum eukaryotic peptide chain release factor subunit 1 (LOC139712498), mRNA blastn 9962 185 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
11641482 11641482 PRJNA1025141_P_NODE_9330_length_251_cov_1.297753_g9269_i0 PRJNA1025141 9330 251 1.297753 3.25736003 Diadema antillarum 105358 Echinodermata other_Eukaryota 241 4.52e-59   NTclustered gi|2919553965|ref|XM_071623235.1| 105358 g9269 i0 84.337 85.2749003984064 249 35 98 4 1 247 953 707 PREDICTED: Diadema antillarum isocitrate dehydrogenase [NADP], mitochondrial-like (LOC139711338), mRNA blastn 21404 241 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;